RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 SPP2Q13103 211 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 GRM1Q13255 1194 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 SNAPC2Q13487 334 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 CCDC84Q86UT8 332 aaPredicted RBP13.44□□□□□ -0.26
HSPG2-202ENST00000374676 ESR2Q92731 530 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 ZIC5Q96T25 663 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
HSPG2-202ENST00000374676 THSD7BQ9C0I4 1608 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-202ENST00000374676 TSPY2A6NKD2 308 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 E7EWF7 191 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 CETPP11597 493 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 HSPA4P34932 840 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 BACE1P56817 501 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 SREBF2Q12772 1141 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 TRDNQ13061 729 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 MKRN3Q13064 507 aaKnown RBP13.43□□□□□ -0.26
HSPG2-202ENST00000374676 C8orf34Q49A92 452 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 SH3D19Q5HYK7 790 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 FAM47AQ5JRC9 791 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
HSPG2-202ENST00000374676 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
HSPG2-202ENST00000374676 SIAH1Q8IUQ4 282 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 MKL1Q969V6 931 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 MTMR4Q9NYA4 1195 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
HSPG2-202ENST00000374676 NEDD4P46934 1319 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 TRIM75PA6NK02 468 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
HSPG2-202ENST00000374676 NOVP48745 357 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 ICA1Q05084 483 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 CCDC178Q5BJE1 867 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 STOX1Q6ZVD7 989 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
HSPG2-202ENST00000374676 NCOA7Q8NI08 942 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 ACER1Q8TDN7 264 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 KIAA1683Q9H0B3 1180 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 SH2D4AQ9H788 454 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 ARHGEF10LQ9HCE6 1279 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 IL17RBQ9NRM6 502 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 TMX2Q9Y320 296 aa13.42□□□□□ -0.26
HSPG2-202ENST00000374676 CCL15-CCL14A0A0B4J2E2 113 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 A0A1W2PRG0 241 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 B4E1Z4 1266 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 KDM4AO75164 1064 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 TTLL1O95922 423 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
HSPG2-202ENST00000374676 USP14P54578 494 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 MOGSQ13724 837 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 KRT32Q14532 448 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 CCL15Q16663 113 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 RASEFQ8IZ41 740 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
HSPG2-202ENST00000374676 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 BRI3BPQ8WY22 251 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 CEP95Q96GE4 821 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 C12orf42Q96LP6 360 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 TTC14Q96N46 770 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 ZSWIM5Q9P217 1185 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 SYNPO2Q9UMS6 1093 aa13.41□□□□□ -0.26
HSPG2-202ENST00000374676 SEC24BO95487 1268 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 MCCP23508 829 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 HMGCS2P54868 508 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
HSPG2-202ENST00000374676 MTMR2Q13614 643 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 RALYLQ86SE5 291 aaKnown RBP13.4□□□□□ -0.26
HSPG2-202ENST00000374676 IQCA1Q86XH1 822 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 CLEC10AQ8IUN9 316 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 ANKS1AQ92625 1134 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 PTPN18Q99952 460 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 MTA3Q9BTC8 594 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 ZCCHC17Q9NP64 241 aaKnown RBP13.4□□□□□ -0.26
HSPG2-202ENST00000374676 CLIP2Q9UDT6 1046 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 LOC285556D6RIA3 1793 aa13.4□□□□□ -0.26
HSPG2-202ENST00000374676 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 GPAT2Q6NUI2 795 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 ANKRD23Q86SG2 305 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 DGKHQ86XP1 1220 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 IFNL1Q8IU54 200 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 MB21D2Q8IYB1 491 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-202ENST00000374676 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
HSPG2-202ENST00000374676 FEZ1Q99689 392 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 VCPKMTQ9H867 229 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 EMILIN3Q9NT22 766 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 TMOD4Q9NZQ9 345 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 SNX14Q9Y5W7 946 aa13.39□□□□□ -0.27
HSPG2-202ENST00000374676 BTBD19C9JJ37 291 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
HSPG2-202ENST00000374676 NMT2O60551 498 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 ATP2B2Q01814 1243 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
HSPG2-202ENST00000374676 GADL1Q6ZQY3 521 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms