RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
PFDN6-202ENST00000374607 RAD21O60216 631 aa18.01■□□□□ 0.47
PFDN6-202ENST00000374607 JAG1P78504 1218 aa18.01■□□□□ 0.47
PFDN6-202ENST00000374607 PPP4R3BQ5MIZ7 849 aa18.01■□□□□ 0.47
PFDN6-202ENST00000374607 FASTKD5Q7L8L6 764 aaKnown RBP18.01■□□□□ 0.47
PFDN6-202ENST00000374607 RALYLQ86SE5 291 aaKnown RBP18.01■□□□□ 0.47
PFDN6-202ENST00000374607 KRT23Q9C075 422 aa18.01■□□□□ 0.47
PFDN6-202ENST00000374607 SH2D4AQ9H788 454 aa18.01■□□□□ 0.47
PFDN6-202ENST00000374607 ORC4O43929 436 aa18■□□□□ 0.47
PFDN6-202ENST00000374607 MCCP23508 829 aa18■□□□□ 0.47
PFDN6-202ENST00000374607 MTMR2Q13614 643 aa18■□□□□ 0.47
PFDN6-202ENST00000374607 ZYXQ15942 572 aaKnown RBP18■□□□□ 0.47
PFDN6-202ENST00000374607 TBC1D10CQ8IV04 446 aa18■□□□□ 0.47
PFDN6-202ENST00000374607 ZIC5Q96T25 663 aa18■□□□□ 0.47
PFDN6-202ENST00000374607 WDR18Q9BV38 432 aa18■□□□□ 0.47
PFDN6-202ENST00000374607 C19orf81C9J6K1 198 aa17.99■□□□□ 0.47
PFDN6-202ENST00000374607 CYP21A2P08686 494 aa17.99■□□□□ 0.47
PFDN6-202ENST00000374607 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
PFDN6-202ENST00000374607 USP14P54578 494 aa17.99■□□□□ 0.47
PFDN6-202ENST00000374607 KCNH4Q9UQ05 1017 aa17.99■□□□□ 0.47
PFDN6-202ENST00000374607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
PFDN6-202ENST00000374607 NT5C2P49902 561 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 HMGCS2P54868 508 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 BACE1P56817 501 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 USP17L2Q6R6M4 530 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 IQCA1Q86XH1 822 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 NEDD1Q8NHV4 660 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 STX8Q9UNK0 236 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 NEDD4P46934 1319 aa17.98■□□□□ 0.47
PFDN6-202ENST00000374607 A0A0G2JLL6 359 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-202ENST00000374607 B4E1Z4 1266 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 SLC27A2O14975 620 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 KDM4AO75164 1064 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 ALDH1A1P00352 501 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 FGRP09769 529 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 EEF2P13639 858 aaKnown RBP17.97■□□□□ 0.47
PFDN6-202ENST00000374607 GUCY1A2P33402 732 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 TM4SF4P48230 202 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.474e-9■■■□□ 17.5
PFDN6-202ENST00000374607 PRRT2Q7Z6L0 340 aaPredicted RBP17.97■□□□□ 0.47
PFDN6-202ENST00000374607 IFNL1Q8IU54 200 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 NCOA7Q8NI08 942 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 NBPF3Q9H094 633 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 GOPCQ9HD26 462 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 WBP1LQ9NX94 342 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 CLIP2Q9UDT6 1046 aa17.97■□□□□ 0.47
PFDN6-202ENST00000374607 LAMA4Q16363 1823 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 E7EWF7 191 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 TTLL1O95922 423 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 NECTIN1Q15223 517 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 CCDC178Q5BJE1 867 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 CLEC10AQ8IUN9 316 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 ACER1Q8TDN7 264 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 BRI3BPQ8WY22 251 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 CEP95Q96GE4 821 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 UBAC1Q9BSL1 405 aa17.96■□□□□ 0.47
PFDN6-202ENST00000374607 ISY1Q9ULR0 285 aaKnown RBP17.96■□□□□ 0.47
PFDN6-202ENST00000374607 ERICH2A1L162 156 aa17.95■□□□□ 0.46
PFDN6-202ENST00000374607 KRT32Q14532 448 aa17.95■□□□□ 0.46
PFDN6-202ENST00000374607 PROCA1Q8NCQ7 364 aaPredicted RBP17.95■□□□□ 0.46
PFDN6-202ENST00000374607 KIAA1683Q9H0B3 1180 aa17.95■□□□□ 0.46
PFDN6-202ENST00000374607 MTMR4Q9NYA4 1195 aa17.95■□□□□ 0.46
PFDN6-202ENST00000374607 NYAP2Q9P242 653 aa17.95■□□□□ 0.46
PFDN6-202ENST00000374607 TACC3Q9Y6A5 838 aa17.95■□□□□ 0.46
PFDN6-202ENST00000374607 TESPA1A2RU30 521 aaPredicted RBP17.94■□□□□ 0.46
PFDN6-202ENST00000374607 BTBD19C9JJ37 291 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 PDHXO00330 501 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 FOXN1O15353 648 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 TRPA1O75762 1119 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 OSBPP22059 807 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 SART3Q15020 963 aaKnown RBP17.94■□□□□ 0.46
PFDN6-202ENST00000374607 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 ZKSCAN3Q9BRR0 538 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
PFDN6-202ENST00000374607 PLIN4Q96Q06 1357 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
PFDN6-202ENST00000374607 CA12O43570 354 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 NMT2O60551 498 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 TAF1CQ15572 869 aaPredicted RBP17.93■□□□□ 0.46
PFDN6-202ENST00000374607 SH3D19Q5HYK7 790 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.93■□□□□ 0.46
PFDN6-202ENST00000374607 ZFYVE28Q9HCC9 887 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 ZSWIM5Q9P217 1185 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 AGTPBP1Q9UPW5 1226 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 MTMR7Q9Y216 660 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 TMX2Q9Y320 296 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 PHIPQ8WWQ0 1821 aa17.93■□□□□ 0.46
PFDN6-202ENST00000374607 THSD7BQ9C0I4 1608 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 IGKV6D-41A0A0C4DH26 115 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 A0A1W2PRG0 241 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
PFDN6-202ENST00000374607 IRX3P78415 501 aaPredicted RBP17.92■□□□□ 0.46
PFDN6-202ENST00000374607 DGKZQ13574 1117 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 SPICE1Q8N0Z3 855 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 LRRC47Q8N1G4 583 aaKnown RBP17.92■□□□□ 0.46
PFDN6-202ENST00000374607 FAM43AQ8N2R8 423 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 LPAR1Q92633 364 aa17.92■□□□□ 0.46
PFDN6-202ENST00000374607 ZSCAN10Q96SZ4 725 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms