RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 IFIT3O14879 490 aaKnown RBP7.04□□□□□ -1.28
PTPN3-202ENST00000374541 SKILP12757 684 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 KRT13P13646 458 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 MAPK8IP2Q13387 824 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-202ENST00000374541 ZKSCAN5Q9Y2L8 839 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 RUFY4Q6ZNE9 571 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 TSGA10Q9BZW7 698 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 DDX21Q9NR30 783 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPN3-202ENST00000374541 E9PCH4 1651 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 PSMA7O14818 248 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 DNA2P51530 1060 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 SCARF1Q14162 830 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 NFIXQ14938 502 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 TMTC2Q8N394 836 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 CCDC82Q8N4S0 544 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 FAM76AQ8TAV0 307 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 FEZ2Q9UHY8 353 aaPredicted RBP7.04□□□□□ -1.28
PTPN3-202ENST00000374541 FAM50BQ9Y247 325 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 GJB2P29033 226 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 UBASH3AP57075 661 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 MAPKAPK5Q8IW41 473 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 TMEM57Q8N5G2 664 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 TRERF1Q96PN7 1200 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 TRPC6Q9Y210 931 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 ALAS1P13196 640 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 RARSP54136 660 aaKnown RBP7.04□□□□□ -1.28
PTPN3-202ENST00000374541 KIF5AQ12840 1032 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 TSNAXIP1Q2TAA8 658 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 CPLX4Q7Z7G2 160 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 ARHGAP24Q8N264 748 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 NKX2-3Q8TAU0 364 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 FAM212AQ96EL1 285 aa7.04□□□□□ -1.28
PTPN3-202ENST00000374541 AATFQ9NY61 560 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPN3-202ENST00000374541 MED14O60244 1454 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 BICDL2A1A5D9 508 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CALM1P0DP23 149 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CALM2P0DP24 149 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CALM3P0DP25 149 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CYP2B6P20813 491 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 GTF2A2P52657 109 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 ATP11AP98196 1134 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CLUL1Q15846 466 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 C1orf228Q6PIY5 440 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 HDXQ7Z353 690 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SMAP1Q8IYB5 467 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CHURC1Q8WUH1 139 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CAPNS2Q96L46 248 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 TBC1D2Q9BYX2 928 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 C6orf50Q9HD87 102 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 TECPR2O15040 1411 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 COL15A1P39059 1388 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 TBC1D9BQ66K14 1250 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CEP57Q86XR8 500 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SYCP3Q8IZU3 236 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 TGFBRAP1Q8WUH2 860 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 MRPS27Q92552 414 aaKnown RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 COA1Q9GZY4 146 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 GLI2P10070 1586 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 MANSC4A6NHS7 340 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 DCDC2CA8MYV0 355 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 IDEP14735 1019 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 GNAQP50148 359 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SOX10P56693 466 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CFAP58Q5T655 872 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 STYK1Q6J9G0 422 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 TTLL7Q6ZT98 887 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 NCOA7Q8NI08 942 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 VCXQ9H320 206 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 ECHDC1Q9NTX5 307 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 IQGAP3Q86VI3 1631 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 PLSCR1O15162 318 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SYKP43405 635 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CERKLQ49MI3 558 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SLC9C2Q5TAH2 1124 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 INTS8Q75QN2 995 aaKnown RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CEP120Q8N960 986 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 CSRNP2Q9H175 543 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 NKIRAS1Q9NYS0 192 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 MTUS1Q9ULD2 1270 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 ZSCAN22P10073 491 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 ARHGAP25P42331 645 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SLC1A4P43007 532 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 ATN1P54259 1190 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 ZSCAN23Q3MJ62 389 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 GNPTABQ3T906 1256 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SSH2Q76I76 1423 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 GPCPD1Q9NPB8 672 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 DNAI1Q9UI46 699 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 SOS2Q07890 1332 aaPredicted RBP7.03□□□□□ -1.28
PTPN3-202ENST00000374541 PARD3Q8TEW0 1356 aa7.03□□□□□ -1.28
PTPN3-202ENST00000374541 GBP1P32455 592 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 CTSWP56202 376 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 CALCOCO2Q13137 446 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 SH2D4BQ5SQS7 431 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 ARHGEF16Q5VV41 709 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 FYB2Q5VWT5 728 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 FCHSD1Q86WN1 690 aa7.02□□□□□ -1.28
PTPN3-202ENST00000374541 GABPB2Q8TAK5 448 aaPredicted RBP7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms