RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 CARD6Q9BX69 1037 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 TOMM22Q9NS69 142 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 FANCGO15287 622 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 IGSF3O75054 1194 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 SPATA1Q5VX52 437 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 CSRNP2Q9H175 543 aa20.45■□□□□ 0.86
PHF1-201ENST00000374512 ZNF831Q5JPB2 1677 aa20.44■□□□□ 0.86
PHF1-201ENST00000374512 MYH6P13533 1939 aa20.44■□□□□ 0.86
PHF1-201ENST00000374512 CCDC66A2RUB6 948 aa20.44■□□□□ 0.86
PHF1-201ENST00000374512 PPARAQ07869 468 aa20.44■□□□□ 0.86
PHF1-201ENST00000374512 NR5A1Q13285 461 aa20.44■□□□□ 0.86
PHF1-201ENST00000374512 CDC5LQ99459 802 aaKnown RBP20.44■□□□□ 0.86
PHF1-201ENST00000374512 MRFAP1Q9Y605 127 aa20.44■□□□□ 0.86
PHF1-201ENST00000374512 AKR1B15C9JRZ8 316 aaPredicted RBP20.43■□□□□ 0.86
PHF1-201ENST00000374512 GSDMAQ96QA5 445 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 CABP5Q9NP86 173 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 ZNF652Q9Y2D9 606 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 TOM1O60784 492 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 CCDC175P0C221 793 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 PCP11498 1178 aaKnown RBP20.43■□□□□ 0.86
PHF1-201ENST00000374512 GOLGA8FQ08AF8 430 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 GOLGA8DPQ0D2H9 430 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 SEC23AQ15436 765 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 SH3RF1Q7Z6J0 888 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 MIGA1Q8NAN2 632 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 BCL9LQ86UU0 1499 aa20.43■□□□□ 0.86
PHF1-201ENST00000374512 ADKP55263 362 aaKnown RBP20.42■□□□□ 0.86
PHF1-201ENST00000374512 TUBB4BP68371 445 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 TUBB2AQ13885 445 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 JAKMIP3Q5VZ66 844 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 MED15Q96RN5 788 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 ZKSCAN3Q9BRR0 538 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 TUBB2BQ9BVA1 445 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
PHF1-201ENST00000374512 PRPF3O43395 683 aaKnown RBP20.42■□□□□ 0.86
PHF1-201ENST00000374512 CYP7A1P22680 504 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 KRT2P35908 639 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 TOGARAM2Q6ZUX3 1019 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 RSRC2Q7L4I2 434 aaKnown RBP20.42■□□□□ 0.86
PHF1-201ENST00000374512 NUP133Q8WUM0 1156 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 RABGGTAQ92696 567 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 KIFC2Q96AC6 838 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 PHF20Q9BVI0 1012 aa20.42■□□□□ 0.86
PHF1-201ENST00000374512 SAMSN1Q9NSI8 373 aaKnown RBP20.42■□□□□ 0.86
PHF1-201ENST00000374512 KCNQ2O43526 872 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 CALM1P0DP23 149 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 CALM2P0DP24 149 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 CALM3P0DP25 149 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 PIP4K2BP78356 416 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 PPP2R3AQ06190 1150 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 OXER1Q8TDS5 423 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 CCDC51Q96ER9 411 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 WDR24Q96S15 920 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 PYM1Q9BRP8 204 aaKnown RBP20.41■□□□□ 0.86
PHF1-201ENST00000374512 BRMS1Q9HCU9 246 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 GNL3LQ9NVN8 582 aaKnown RBP20.41■□□□□ 0.86
PHF1-201ENST00000374512 ZNF804BA4D1E1 1349 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 FILIP1LQ4L180 1135 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 CLEC4GQ6UXB4 293 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 PPFIBP1Q86W92 1011 aa20.41■□□□□ 0.86
PHF1-201ENST00000374512 TRMT44Q8IYL2 757 aaKnown RBP20.41■□□□□ 0.86
PHF1-201ENST00000374512 TNKSO95271 1327 aa20.4■□□□□ 0.86
PHF1-201ENST00000374512 PLA2G4AP47712 749 aa20.4■□□□□ 0.86
PHF1-201ENST00000374512 CUL4BQ13620 913 aa20.4■□□□□ 0.86
PHF1-201ENST00000374512 ZNF827Q17R98 1081 aa20.4■□□□□ 0.86
PHF1-201ENST00000374512 CDKAL1Q5VV42 579 aa20.4■□□□□ 0.86
PHF1-201ENST00000374512 APTXQ7Z2E3 356 aaKnown RBP20.4■□□□□ 0.86
PHF1-201ENST00000374512 PBX1P40424 430 aa20.39■□□□□ 0.86
PHF1-201ENST00000374512 HSP90AA4PQ58FG1 418 aa20.39■□□□□ 0.86
PHF1-201ENST00000374512 GRAMD1CQ8IYS0 662 aa20.39■□□□□ 0.86
PHF1-201ENST00000374512 CCDC82Q8N4S0 544 aa20.39■□□□□ 0.86
PHF1-201ENST00000374512 ABCF2Q9UG63 623 aa20.39■□□□□ 0.86
PHF1-201ENST00000374512 SYNRGQ9UMZ2 1314 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 MAGEB6P1A0A0J9YX57 407 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 TEX35Q5T0J7 233 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 CATIPQ7Z7H3 387 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 ANKRD18AQ8IVF6 992 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 PAGE5Q96GU1 130 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 ADD3Q9UEY8 706 aaKnown RBP20.39■□□□□ 0.85
PHF1-201ENST00000374512 A0A1B0GUL6 1792 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 ITIH6Q6UXX5 1313 aa20.39■□□□□ 0.85
PHF1-201ENST00000374512 FUT2Q10981 343 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 PKN1Q16512 942 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 USP49Q70CQ1 688 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 FAM177A1Q8N128 213 aaPredicted RBP20.38■□□□□ 0.85
PHF1-201ENST00000374512 GOLGA1Q92805 767 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 DHX58Q96C10 678 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 ZSCAN10Q96SZ4 725 aaPredicted RBP20.38■□□□□ 0.85
PHF1-201ENST00000374512 IQSEC3Q9UPP2 1182 aaPredicted RBP20.38■□□□□ 0.85
PHF1-201ENST00000374512 DPYDQ12882 1025 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 UBE4AQ14139 1066 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 PTPN21Q16825 1174 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 FAM98CQ17RN3 349 aaKnown RBP20.38■□□□□ 0.85
PHF1-201ENST00000374512 ADGRA1Q86SQ6 560 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 CNGA4Q8IV77 575 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 CMTR1Q8N1G2 835 aaKnown RBP20.38■□□□□ 0.85
PHF1-201ENST00000374512 IGSF22Q8N9C0 903 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 UBXN6Q9BZV1 441 aa20.38■□□□□ 0.85
PHF1-201ENST00000374512 MINDY4BA8MYZ0 360 aa20.37■□□□□ 0.85
PHF1-201ENST00000374512 FGRP09769 529 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms