RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 ERICH4A6NGS2 130 aa13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 LIFRP42702 1097 aa13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 SHC4Q6S5L8 630 aa13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
PACSIN1-202ENST00000374043 USP27XA6NNY8 438 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 KIAA0825Q8IV33 1275 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 ALDH8A1Q9H2A2 487 aaPredicted RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 COL5A2P05997 1499 aaPredicted RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 NTSR2O95665 410 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 CALML3P27482 149 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 USP17L2Q6R6M4 530 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 DYMQ7RTS9 669 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 SH3RF3Q8TEJ3 882 aaPredicted RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 BAG1Q99933 345 aaPredicted RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 SAMSN1Q9NSI8 373 aaKnown RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 PAXBP1Q9Y5B6 917 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 SCG2P13521 617 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 ZYXQ15942 572 aaKnown RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 TXNRD3Q86VQ6 643 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 SLF2Q8IX21 1173 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 IGSF22Q8N9C0 903 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 NWD1Q149M9 1564 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 CAMTA1Q9Y6Y1 1673 aa13.38□□□□□ -0.27
PACSIN1-202ENST00000374043 KLRF2D3W0D1 207 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 UBXN1Q04323 297 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 CALML4Q96GE6 196 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 TTF2Q9UNY4 1162 aaKnown RBP13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 KIF5CO60282 957 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 GNAQP50148 359 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 CACNB3P54284 484 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 NFIXQ14938 502 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 ELF2Q15723 593 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 BMP2KQ9NSY1 1161 aaPredicted RBP13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 EXOC1Q9NV70 894 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 CCDC148Q8NFR7 591 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 SERPINB2P05120 415 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 HLA-DOAP06340 250 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 ZNF215Q9UL58 517 aaPredicted RBP13.37□□□□□ -0.27
PACSIN1-202ENST00000374043 FAM193AP78312 1265 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 EVX2Q03828 476 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 ARID5AQ03989 594 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 CTR9Q6PD62 1173 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 DCP1AQ9NPI6 582 aaPredicted RBP13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 TBC1D7Q9P0N9 293 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 TMEM266Q2M3C6 531 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 MRFAP1L1Q96HT8 127 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 SYNRGQ9UMZ2 1314 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 FAM196BA6NMK8 535 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 RBM26Q5T8P6 1007 aaKnown RBP13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 STAG1Q8WVM7 1258 aa13.36□□□□□ -0.27
PACSIN1-202ENST00000374043 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 BLIDQ8IZY5 108 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 SLU7O95391 586 aaKnown RBP13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 BMP15O95972 392 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 DPP8Q6V1X1 898 aaPredicted RBP13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 MMRN2Q9H8L6 949 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 MAN1B1Q9UKM7 699 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 SLC16A2P36021 539 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 TECP42680 631 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 MATR3P43243 847 aaKnown RBP eCLIP13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 SEPT12Q8IYM1 358 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 GUCA1BQ9UMX6 200 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 MROH7-TTC4A0A0A0MT08 1334 aa13.35□□□□□ -0.27
PACSIN1-202ENST00000374043 KIF2AO00139 706 aaPredicted RBP13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 RBM6P78332 1123 aaKnown RBP13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 TCERG1LQ5VWI1 586 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 STAG2Q8N3U4 1231 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 MLKLQ8NB16 471 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 NKX2-3Q8TAU0 364 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 DPF2Q92785 391 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 RFX7Q2KHR2 1363 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 IQCB1Q15051 598 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 TMCO3Q6UWJ1 677 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 FUCA2Q9BTY2 467 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 CARD6Q9BX69 1037 aa13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 RNF26Q9BY78 433 aaPredicted RBP13.34□□□□□ -0.27
PACSIN1-202ENST00000374043 QTRT2Q9H974 415 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms