RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 LRRC2Q9BYS8 371 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 CAMTA1Q9Y6Y1 1673 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 CRNKL1Q9BZJ0 848 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 PDE11AQ9HCR9 933 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 SLC12A7Q9Y666 1083 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 AFF2P51816 1311 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 LRRC24Q50LG9 513 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 LRRC45Q96CN5 670 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 G3BP2Q9UN86 482 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 STRCQ7RTU9 1775 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 ARFGEF2Q9Y6D5 1785 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 SLC27A2O14975 620 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 CCT2P78371 535 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 Q6ZUG5 572 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 PUF60Q9UHX1 559 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.36□□□□□ -1.236e-7■■■■□ 20
CHD6-203ENST00000373233 SLC4A4Q9Y6R1 1079 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 TNS2Q63HR2 1409 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 ZSCAN22P10073 491 aaPredicted RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 ADORA1P30542 326 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 CNNM3Q8NE01 707 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 CPLX3Q8WVH0 158 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 DDX23Q9BUQ8 820 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 ZNF219Q9P2Y4 722 aaPredicted RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 ZNF215Q9UL58 517 aaPredicted RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 C5P01031 1676 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 POLD1P28340 1107 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 EPHA10Q5JZY3 1008 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 FAM71BQ8TC56 605 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 PALMDQ9NP74 551 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 COL15A1P39059 1388 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 RANBP6O60518 1105 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 NBPF26B4DH59 902 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 PPFIA4O75335 1185 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 PCYT1AP49585 367 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 TMEM67Q5HYA8 995 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 NBPF14Q5TI25 921 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 NBPF10Q6P3W6 841 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 NLRP10Q86W26 655 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 NBPF15Q8N660 670 aa7.36□□□□□ -1.23
CHD6-203ENST00000373233 KRI1Q8N9T8 703 aaKnown RBP7.36□□□□□ -1.23
CHD6-203ENST00000373233 MAGEB6P1A0A0J9YX57 407 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 KBTBD3Q8NAB2 608 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 TCEANC2Q96MN5 208 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 PPP1R9BQ96SB3 815 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 TLR7Q9NYK1 1049 aaKnown RBP7.35□□□□□ -1.23
CHD6-203ENST00000373233 LARSQ9P2J5 1176 aaKnown RBP7.35□□□□□ -1.23
CHD6-203ENST00000373233 ITGB4P16144 1822 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 A0A0D9SFI3 127 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 E7EVH7 732 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 GNAT2P19087 354 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 VPS72Q15906 364 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 CCDC96Q2M329 555 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 USP48Q86UV5 1035 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 HOOK3Q86VS8 718 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 TAF5LO75529 589 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 E2F5Q15329 346 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 APBB1IPQ7Z5R6 666 aaPredicted RBP7.35□□□□□ -1.23
CHD6-203ENST00000373233 GNGT1P63211 74 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 NECAB1Q8N987 351 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 SPATA5Q8NB90 893 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 LPIN2Q92539 896 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 KRT23Q9C075 422 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 GREM2Q9H772 168 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 PSMD7P51665 324 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 MTX1Q13505 466 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 RBM26Q5T8P6 1007 aaKnown RBP7.35□□□□□ -1.23
CHD6-203ENST00000373233 SMARCC2Q8TAQ2 1214 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 IFIT3O14879 490 aaKnown RBP7.35□□□□□ -1.23
CHD6-203ENST00000373233 BAG3O95817 575 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 ATICP31939 592 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 CFAP58Q5T655 872 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 SEPT12Q8IYM1 358 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 PPP1R14CQ8TAE6 165 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 FAM210AQ96ND0 272 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 CCT5P48643 541 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 POLE2P56282 527 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 LCA5Q86VQ0 697 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 ACRBPQ8NEB7 543 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 PUS3Q9BZE2 481 aaKnown RBP7.35□□□□□ -1.23
CHD6-203ENST00000373233 UFL1O94874 794 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 CPA1P15085 419 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 ARMC2Q8NEN0 867 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 RMI1Q9H9A7 625 aa7.35□□□□□ -1.23
CHD6-203ENST00000373233 PLEKHA4Q9H4M7 779 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 XIRP1Q702N8 1843 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 AK2P54819 239 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 BRD3Q15059 726 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 GNPTABQ3T906 1256 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 WDR78Q5VTH9 848 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 CAPS2Q9BXY5 557 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 DBNLQ9UJU6 430 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 SNX14Q9Y5W7 946 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 H7C1W4 665 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 VIMP08670 466 aaKnown RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 CYP19A1P11511 503 aaPredicted RBP7.34□□□□□ -1.23
CHD6-203ENST00000373233 TRAF1Q13077 416 aa7.34□□□□□ -1.23
CHD6-203ENST00000373233 FKBP15Q5T1M5 1219 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms