RNA–Protein interactions for RNA: ENST00000372478.4

C9orf50-201, Transcript of chromosome 9 open reading frame 50, humanhuman

APPRIS P2 TSL 2 BASIC

Gene C9orf50, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50-201ENST00000372478 SAGE1Q9NXZ1 904 aa29.94■■■□□ 2.38
C9orf50-201ENST00000372478 USP17L10C9JJH3 530 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 TBC1D8O95759 1140 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 FASTKD5Q7L8L6 764 aaKnown RBP29.93■■■□□ 2.38
C9orf50-201ENST00000372478 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.93■■■□□ 2.38
C9orf50-201ENST00000372478 ZNF213O14771 459 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 ALDH1A1P00352 501 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 ZYXQ15942 572 aaKnown RBP29.93■■■□□ 2.38
C9orf50-201ENST00000372478 GPAT2Q6NUI2 795 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 TBC1D10CQ8IV04 446 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 FEZ1Q99689 392 aa29.93■■■□□ 2.38
C9orf50-201ENST00000372478 HSPA8P11142 646 aaKnown RBP29.92■■■□□ 2.38
C9orf50-201ENST00000372478 FAM47AQ5JRC9 791 aa29.92■■■□□ 2.38
C9orf50-201ENST00000372478 CASC1Q6TDU7 716 aa29.92■■■□□ 2.38
C9orf50-201ENST00000372478 R3HDMLQ9H3Y0 253 aa29.92■■■□□ 2.38
C9orf50-201ENST00000372478 CTNNA3Q9UI47 895 aa29.92■■■□□ 2.38
C9orf50-201ENST00000372478 CTCFP49711 727 aaPredicted RBP29.91■■■□□ 2.38
C9orf50-201ENST00000372478 ICA1Q05084 483 aa29.91■■■□□ 2.38
C9orf50-201ENST00000372478 SH3D19Q5HYK7 790 aa29.91■■■□□ 2.38
C9orf50-201ENST00000372478 ANKRD23Q86SG2 305 aa29.91■■■□□ 2.38
C9orf50-201ENST00000372478 TOMM22Q9NS69 142 aa29.91■■■□□ 2.38
C9orf50-201ENST00000372478 A0A1W2PRG0 241 aa29.9■■■□□ 2.38
C9orf50-201ENST00000372478 PDHXO00330 501 aa29.9■■■□□ 2.38
C9orf50-201ENST00000372478 SIAH1Q8IUQ4 282 aa29.9■■■□□ 2.38
C9orf50-201ENST00000372478 C19orf81C9J6K1 198 aa29.89■■■□□ 2.38
C9orf50-201ENST00000372478 TFAP4Q01664 338 aa29.89■■■□□ 2.38
C9orf50-201ENST00000372478 ATP2B2Q01814 1243 aa29.89■■■□□ 2.38
C9orf50-201ENST00000372478 TAF1CQ15572 869 aaPredicted RBP29.89■■■□□ 2.38
C9orf50-201ENST00000372478 IMMTQ16891 758 aaKnown RBP29.89■■■□□ 2.38
C9orf50-201ENST00000372478 RRP12Q5JTH9 1297 aaKnown RBP29.89■■■□□ 2.38
C9orf50-201ENST00000372478 TREML2Q5T2D2 321 aa29.89■■■□□ 2.38
C9orf50-201ENST00000372478 KIAA1211Q6ZU35 1233 aa29.89■■■□□ 2.38
C9orf50-201ENST00000372478 ORC4O43929 436 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 FGRP09769 529 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 TSPY3P0CV98 308 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 TSPY8P0CW00 308 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 LBX1P52954 281 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 CRHR2Q13324 411 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 AKNAD1Q5T1N1 836 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 PROCA1Q8NCQ7 364 aaPredicted RBP29.89■■■□□ 2.37
C9orf50-201ENST00000372478 KANSL2Q9H9L4 492 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 EMILIN3Q9NT22 766 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 TMOD4Q9NZQ9 345 aa29.89■■■□□ 2.37
C9orf50-201ENST00000372478 RANBP6O60518 1105 aaKnown RBP29.88■■■□□ 2.37
C9orf50-201ENST00000372478 EEF2P13639 858 aaKnown RBP29.88■■■□□ 2.37
C9orf50-201ENST00000372478 STAG1Q8WVM7 1258 aa29.88■■■□□ 2.37
C9orf50-201ENST00000372478 LSG1Q9H089 658 aaKnown RBP29.88■■■□□ 2.37
C9orf50-201ENST00000372478 AGTPBP1Q9UPW5 1226 aa29.88■■■□□ 2.37
C9orf50-201ENST00000372478 U3KPZ7 1027 aaPredicted RBP29.88■■■□□ 2.37
C9orf50-201ENST00000372478 USP17L2Q6R6M4 530 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 MFSD6Q6ZSS7 791 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 NEDD1Q8NHV4 660 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 MAP4K1Q92918 833 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 KIAA1683Q9H0B3 1180 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 ARHGEF10LQ9HCE6 1279 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 ZCCHC17Q9NP64 241 aaKnown RBP29.87■■■□□ 2.37
C9orf50-201ENST00000372478 ANO2Q9NQ90 1003 aa29.87■■■□□ 2.37
C9orf50-201ENST00000372478 IGKV6D-41A0A0C4DH26 115 aa29.86■■■□□ 2.37
C9orf50-201ENST00000372478 TSPY2A6NKD2 308 aa29.86■■■□□ 2.37
C9orf50-201ENST00000372478 MYH4Q9Y623 1939 aa29.86■■■□□ 2.37
C9orf50-201ENST00000372478 NKX2-3Q8TAU0 364 aa29.85■■■□□ 2.37
C9orf50-201ENST00000372478 CEP95Q96GE4 821 aa29.85■■■□□ 2.37
C9orf50-201ENST00000372478 CFHR5Q9BXR6 569 aa29.85■■■□□ 2.37
C9orf50-201ENST00000372478 RNF41Q9H4P4 317 aaPredicted RBP29.85■■■□□ 2.37
C9orf50-201ENST00000372478 RBM8AQ9Y5S9 174 aaKnown RBP29.85■■■□□ 2.37
C9orf50-201ENST00000372478 NEDD4P46934 1319 aa29.85■■■□□ 2.37
C9orf50-201ENST00000372478 PLIN4Q96Q06 1357 aa29.85■■■□□ 2.37
C9orf50-201ENST00000372478 ZFYVE28Q9HCC9 887 aa29.85■■■□□ 2.37
C9orf50-201ENST00000372478 CASP8AP2Q9UKL3 1982 aa29.84■■■□□ 2.37
C9orf50-201ENST00000372478 CYP2C8P10632 490 aa29.84■■■□□ 2.37
C9orf50-201ENST00000372478 USP14P54578 494 aa29.84■■■□□ 2.37
C9orf50-201ENST00000372478 CYP21A2P08686 494 aa29.83■■■□□ 2.37
C9orf50-201ENST00000372478 TMX2Q9Y320 296 aa29.83■■■□□ 2.37
C9orf50-201ENST00000372478 NMT2O60551 498 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 PCP11498 1178 aaKnown RBP29.82■■■□□ 2.36
C9orf50-201ENST00000372478 C12orf42Q96LP6 360 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 SH2D4AQ9H788 454 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 MTMR4Q9NYA4 1195 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 SLC45A1Q9Y2W3 748 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 KIAA1755Q5JYT7 1200 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 NYAP2Q9P242 653 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 CLIP2Q9UDT6 1046 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 TAF6LQ9Y6J9 622 aa29.82■■■□□ 2.36
C9orf50-201ENST00000372478 GPR25O00155 361 aa29.81■■■□□ 2.36
C9orf50-201ENST00000372478 VCAM1P19320 739 aa29.81■■■□□ 2.36
C9orf50-201ENST00000372478 PARK7Q99497 189 aaKnown RBP29.81■■■□□ 2.36
C9orf50-201ENST00000372478 IL17RBQ9NRM6 502 aa29.81■■■□□ 2.36
C9orf50-201ENST00000372478 B4E1Z4 1266 aa29.79■■■□□ 2.36
C9orf50-201ENST00000372478 PABPC4Q13310 644 aaKnown RBP eCLIP29.79■■■□□ 2.36
C9orf50-201ENST00000372478 SPICE1Q8N0Z3 855 aa29.79■■■□□ 2.36
C9orf50-201ENST00000372478 VCPKMTQ9H867 229 aa29.79■■■□□ 2.36
C9orf50-201ENST00000372478 RAD21O60216 631 aa29.78■■■□□ 2.36
C9orf50-201ENST00000372478 TLR2O60603 784 aa29.78■■■□□ 2.36
C9orf50-201ENST00000372478 TTLL1O95922 423 aa29.78■■■□□ 2.36
C9orf50-201ENST00000372478 ESR2Q92731 530 aa29.78■■■□□ 2.36
C9orf50-201ENST00000372478 ASCC2Q9H1I8 757 aaPredicted RBP29.78■■■□□ 2.36
C9orf50-201ENST00000372478 KDM4AO75164 1064 aa29.78■■■□□ 2.36
C9orf50-201ENST00000372478 LRRC47Q8N1G4 583 aaKnown RBP29.78■■■□□ 2.36
C9orf50-201ENST00000372478 ZNF296Q8WUU4 475 aaPredicted RBP29.78■■■□□ 2.36
C9orf50-201ENST00000372478 CPA4Q9UI42 421 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms