RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 TATDN1Q6P1N9 297 aa18.75■□□□□ 0.59
C9orf78-201ENST00000372447 ARMC9Q7Z3E5 817 aa18.75■□□□□ 0.59
C9orf78-201ENST00000372447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
C9orf78-201ENST00000372447 WRNIP1Q96S55 665 aa18.75■□□□□ 0.59
C9orf78-201ENST00000372447 VPS37CA5D8V6 355 aaPredicted RBP18.74■□□□□ 0.59
C9orf78-201ENST00000372447 TMEM88BA6NKF7 163 aa18.74■□□□□ 0.59
C9orf78-201ENST00000372447 INPP5BP32019 993 aa18.74■□□□□ 0.59
C9orf78-201ENST00000372447 IREB2P48200 963 aaKnown RBP18.74■□□□□ 0.59
C9orf78-201ENST00000372447 TMEM87AQ8NBN3 555 aa18.74■□□□□ 0.59
C9orf78-201ENST00000372447 SWAP70Q9UH65 585 aa18.74■□□□□ 0.59
C9orf78-201ENST00000372447 LAMA4Q16363 1823 aa18.74■□□□□ 0.59
C9orf78-201ENST00000372447 PFKFB2O60825 505 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 PRDM1O75626 825 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 APLP1P51693 650 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 LDLRAD1Q5T700 205 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.73■□□□□ 0.59
C9orf78-201ENST00000372447 GAS2L3Q86XJ1 694 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 TBC1D10CQ8IV04 446 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 FBXL16Q8N461 479 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 ZKSCAN4Q969J2 545 aaPredicted RBP18.73■□□□□ 0.59
C9orf78-201ENST00000372447 GRPEL1Q9HAV7 217 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 TRPM7Q96QT4 1865 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 SLC3A2P08195 630 aaKnown RBP18.73■□□□□ 0.59
C9orf78-201ENST00000372447 MAP3K9P80192 1104 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 SCRN1Q12765 414 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 ZSCAN23Q3MJ62 389 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 SAPCD2Q86UD0 394 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 GDPD2Q9HCC8 539 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 TAOK2Q9UL54 1235 aa18.73■□□□□ 0.59
C9orf78-201ENST00000372447 FGRP09769 529 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 ZNF445P59923 1031 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 C1QTNF8P60827 252 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 JAG1P78504 1218 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 PDE4BQ07343 736 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 APOBRQ0VD83 1088 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 MKNK2Q9HBH9 465 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 BRPF3Q9ULD4 1205 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
C9orf78-201ENST00000372447 CTNND1O60716 968 aaKnown RBP18.71■□□□□ 0.59
C9orf78-201ENST00000372447 CAP2P40123 477 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 HUNKP57058 714 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 SHROOM1Q2M3G4 852 aaPredicted RBP18.71■□□□□ 0.59
C9orf78-201ENST00000372447 CERKLQ49MI3 558 aaPredicted RBP18.71■□□□□ 0.59
C9orf78-201ENST00000372447 AKNAD1Q5T1N1 836 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 CHST3Q7LGC8 479 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 ANKRD13AQ8IZ07 590 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 STAG1Q8WVM7 1258 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 CLMNQ96JQ2 1002 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 LLPHQ9BRT6 129 aaKnown RBP18.71■□□□□ 0.59
C9orf78-201ENST00000372447 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.71■□□□□ 0.59
C9orf78-201ENST00000372447 TLL2Q9Y6L7 1015 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 PAPPA2Q9BXP8 1791 aa18.71■□□□□ 0.59
C9orf78-201ENST00000372447 JAK2O60674 1132 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 GDF11O95390 407 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 RASA1P20936 1047 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 VGLL4Q14135 290 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 MFSD6Q6ZSS7 791 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 MB21D2Q8IYB1 491 aaPredicted RBP18.7■□□□□ 0.58
C9orf78-201ENST00000372447 NCOA7Q8NI08 942 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 ZNF274Q96GC6 653 aaPredicted RBP18.7■□□□□ 0.58
C9orf78-201ENST00000372447 ZNF287Q9HBT7 754 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 RBM27Q9P2N5 1060 aaKnown RBP18.7■□□□□ 0.58
C9orf78-201ENST00000372447 LAMB1P07942 1786 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 MCM5P33992 734 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 CREBZFQ9NS37 354 aa18.7■□□□□ 0.58
C9orf78-201ENST00000372447 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.7■□□□□ 0.58
C9orf78-201ENST00000372447 ABT1Q9ULW3 272 aaKnown RBP18.7■□□□□ 0.58
C9orf78-201ENST00000372447 GADD45BO75293 160 aaPredicted RBP18.69■□□□□ 0.58
C9orf78-201ENST00000372447 RALYLQ86SE5 291 aaKnown RBP18.69■□□□□ 0.58
C9orf78-201ENST00000372447 SMARCC2Q8TAQ2 1214 aa18.69■□□□□ 0.58
C9orf78-201ENST00000372447 NKX2-3Q8TAU0 364 aa18.69■□□□□ 0.58
C9orf78-201ENST00000372447 TMEM63CQ9P1W3 806 aa18.69■□□□□ 0.58
C9orf78-201ENST00000372447 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.69■□□□□ 0.58
C9orf78-201ENST00000372447 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
C9orf78-201ENST00000372447 UNCXA6NJT0 531 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 ORC4O43929 436 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 AKR1B1P15121 316 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 PDIA3P30101 505 aaKnown RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 NEDD4P46934 1319 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 EVCP57679 992 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 DNM1Q05193 864 aaKnown RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 CSPP1Q1MSJ5 1256 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 ABCB5Q2M3G0 1257 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 NOL9Q5SY16 702 aaKnown RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 SCYL3Q8IZE3 742 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 TOMM22Q9NS69 142 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 CSADQ9Y600 493 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 PRC1O43663 620 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 GH2P01242 217 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 PCP11498 1178 aaKnown RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 FAM47AQ5JRC9 791 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 NSUN7Q8NE18 718 aaKnown RBP18.68■□□□□ 0.58
C9orf78-201ENST00000372447 CCDC17Q96LX7 622 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 ELP3Q9H9T3 547 aa18.68■□□□□ 0.58
C9orf78-201ENST00000372447 MPHOSPH10O00566 681 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms