RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 USP17L21D6R901 530 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 CYP2E1P05181 493 aaPredicted RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 CASP7P55210 303 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 IRX1P78414 480 aaPredicted RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 SMC1AQ14683 1233 aaKnown RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 ZKSCAN8Q15776 578 aaPredicted RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 JAKMIP3Q5VZ66 844 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 INTS5Q6P9B9 1019 aaKnown RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 LEO1Q8WVC0 666 aaPredicted RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 MINPP1Q9UNW1 487 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 PNMA6AP0CW24 399 aaPredicted RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 HSPA1LP34931 641 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 NT5C2P49902 561 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 RBM6P78332 1123 aaKnown RBP11.36□□□□□ -0.59
KDM4A-201ENST00000372396 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 NTSR2O95665 410 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 SCRN1Q12765 414 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 CCDC102AQ96A19 550 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 CENPHQ9H3R5 247 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 VPS18Q9P253 973 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 RGL2O15211 777 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 PRDM1O75626 825 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 KRT18P05783 430 aaKnown RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 DDIT3P35638 169 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 RBBP5Q15291 538 aaKnown RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 ZNF654Q8IZM8 581 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 RRP36Q96EU6 259 aaKnown RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 STRBPQ96SI9 672 aaKnown RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 ANO1Q5XXA6 986 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 PDILTQ8N807 584 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 SDR42E1Q8WUS8 393 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 CUL5Q93034 780 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 VAT1LQ9HCJ6 419 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 C6orf50Q9HD87 102 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 FAM208AQ9UK61 1670 aaKnown RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 FAM160A1Q05DH4 1040 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 KRT40Q6A162 431 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 CNKSR1Q969H4 720 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 EXOC4Q96A65 974 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 LZTS2Q9BRK4 669 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 TCP11L1Q9NUJ3 509 aa11.35□□□□□ -0.59
KDM4A-201ENST00000372396 SAP30BPQ9UHR5 308 aaKnown RBP11.35□□□□□ -0.59
KDM4A-201ENST00000372396 ZNF76P36508 570 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 SNW1Q13573 536 aaKnown RBP11.34□□□□□ -0.59
KDM4A-201ENST00000372396 HEATR3Q7Z4Q2 680 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 KIAA1328Q86T90 577 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
KDM4A-201ENST00000372396 IRF6O14896 467 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 PARP1P09874 1014 aaKnown RBP11.34□□□□□ -0.59
KDM4A-201ENST00000372396 NEDD9Q14511 834 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 ALX1Q15699 326 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 ERCC6LQ2NKX8 1250 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 YEATS4O95619 227 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 MARCKSP29966 332 aaPredicted RBP11.34□□□□□ -0.59
KDM4A-201ENST00000372396 NAPAP54920 295 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 TYRO3Q06418 890 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 C2CD5Q86YS7 1000 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 LCORLQ8N3X6 602 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 TGFBRAP1Q8WUH2 860 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 EHMT1Q9H9B1 1298 aa11.34□□□□□ -0.59
KDM4A-201ENST00000372396 CACNA1FO60840 1977 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 ERLIN1O75477 346 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 GNA11P29992 359 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 GCKP35557 465 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 GTF2IP78347 998 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 KRI1Q8N9T8 703 aaKnown RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 NSUN7Q8NE18 718 aaKnown RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 LCMT1Q9UIC8 334 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 A0A087WUV0 522 aaPredicted RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 FAM173BQ6P4H8 233 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 PACS2Q86VP3 889 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 CELF1Q92879 486 aaKnown RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 MYL10Q9BUA6 226 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 TNKSO95271 1327 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 UBA7P41226 1012 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 ANO6Q4KMQ2 910 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 MAPKAPK5Q8IW41 473 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 DIS3L2Q8IYB7 885 aaKnown RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 PARP4Q9UKK3 1724 aaKnown RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 DDAH1O94760 285 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 LARGE1O95461 756 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 CLNS1AP54105 237 aaKnown RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
KDM4A-201ENST00000372396 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 MYO6Q9UM54 1294 aa11.33□□□□□ -0.6
KDM4A-201ENST00000372396 ELP1O95163 1332 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 UBN2Q6ZU65 1347 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 NPR1P16066 1061 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 CLCN6P51797 869 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 TFAP4Q01664 338 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 PPFIBP1Q86W92 1011 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 PHKBQ93100 1093 aa11.32□□□□□ -0.6
KDM4A-201ENST00000372396 TACO1Q9BSH4 297 aaKnown RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 TRIM6Q9C030 488 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 SH2B2O14492 632 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 GADD45BO75293 160 aaPredicted RBP11.32□□□□□ -0.6
KDM4A-201ENST00000372396 LIFRP42702 1097 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms