RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 BCL2L12Q9HB09 334 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 FMNL3Q8IVF7 1028 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 ARHGEF2Q92974 986 aaKnown RBP26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 CFAP57Q96MR6 1250 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 PPP1R12CQ9BZL4 782 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 PTPN21Q16825 1174 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 C2CD5Q86YS7 1000 aa26.58■■□□□ 1.85
RAPGEF1-203ENST00000372195 CTTNBP2Q8WZ74 1663 aa26.58■■□□□ 1.84
RAPGEF1-203ENST00000372195 CFBP00751 764 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 CLUL1Q15846 466 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 IFT74Q96LB3 600 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 BUB1O43683 1085 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 KRT19P08727 400 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 CCDC105Q8IYK2 499 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 ORAI2Q96SN7 254 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 DNM3Q9UQ16 869 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 TPCN1Q9ULQ1 816 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 ARHGAP6O43182 974 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 TFAP4Q01664 338 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 CLNS1AP54105 237 aaKnown RBP26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 PSMD6Q15008 389 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 LPIN2Q92539 896 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 CLIC6Q96NY7 704 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 ARHGEF10LQ9HCE6 1279 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 SWAP70Q9UH65 585 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 CCNL1Q9UK58 526 aaPredicted RBP26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 UHRF1BP1Q6BDS2 1440 aa26.57■■□□□ 1.84
RAPGEF1-203ENST00000372195 EXOC3O60645 756 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 NOL3O60936 208 aaKnown RBP26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 TUBBP07437 444 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 PPP1R2P41236 205 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 ITIH3Q06033 890 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 GPT2Q8TD30 523 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 B4DLN1 442 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 VPS52Q8N1B4 723 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 PPFIBP2Q8ND30 876 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 TMCO4Q5TGY1 634 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 SLC1A4P43007 532 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 ZNF518AQ6AHZ1 1483 aa26.56■■□□□ 1.84
RAPGEF1-203ENST00000372195 NEDD9Q14511 834 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 TPH2Q8IWU9 490 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 KIAA1524Q8TCG1 905 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 ANKRD42Q8N9B4 389 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 CSRNP2Q9H175 543 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 SBNO1A3KN83 1393 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 PEX26Q7Z412 305 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 IFIH1Q9BYX4 1025 aaKnown RBP26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 TECP42680 631 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 PPARAQ07869 468 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 CCDC110Q8TBZ0 833 aa26.55■■□□□ 1.84
RAPGEF1-203ENST00000372195 ABCB4P21439 1286 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 BRD1O95696 1058 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 TBC1D8O95759 1140 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 GAS8O95995 478 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 GOLGA8FQ08AF8 430 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 GOLGA8DPQ0D2H9 430 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 RPS6KA1Q15418 735 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 CCT6BQ92526 530 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 PFDN4Q9NQP4 134 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 ADAT2Q7Z6V5 191 aaKnown RBP26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 SDR42E1Q8WUS8 393 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 C19orf44Q9H6X5 657 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 PICK1Q9NRD5 415 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 PCDHB13Q9Y5F0 798 aa26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 U2AF1L4Q8WU68 220 aaKnown RBP26.54■■□□□ 1.84
RAPGEF1-203ENST00000372195 LONRF2Q1L5Z9 754 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 KRT25Q7Z3Z0 450 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 PNMA8AQ86V59 439 aaPredicted RBP26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 DNAJC10Q8IXB1 793 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 ZNF408Q9H9D4 720 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 KCNJ18B7U540 433 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 KCNJ12Q14500 433 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 HHATQ5VTY9 493 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 USP28Q96RU2 1077 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 CASC4Q6P4E1 433 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 DCUN1D2Q6PH85 259 aa26.53■■□□□ 1.84
RAPGEF1-203ENST00000372195 CFAP221Q4G0U5 840 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 STK38LQ9Y2H1 464 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 TTLL3Q9Y4R7 772 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 NEURL1BA8MQ27 555 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 CYP2J2P51589 502 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 CLIC4Q9Y696 253 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 SMCO2A6NFE2 343 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 MORC3Q14149 939 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 ERCC6LQ2NKX8 1250 aa26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 EIF4A1P60842 406 aaKnown RBP26.52■■□□□ 1.84
RAPGEF1-203ENST00000372195 TMOD4Q9NZQ9 345 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 EXOC7Q9UPT5 735 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 GOLGA8HP0CJ92 632 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 NBPF14Q5TI25 921 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 GPKOWQ92917 476 aaPredicted RBP eCLIP26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 TTC19Q6DKK2 380 aaPredicted RBP26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 HAUS7Q99871 368 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 NOP56O00567 594 aaKnown RBP26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 ZWINTO95229 277 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 TUBB2AQ13885 445 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 VSIG1Q86XK7 387 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 RPUSD2Q8IZ73 545 aaKnown RBP26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 TUBB2BQ9BVA1 445 aa26.51■■□□□ 1.83
RAPGEF1-203ENST00000372195 SH2D4AQ9H788 454 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms