RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 PIM2Q9P1W9 311 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 GOLGA6L4A6NEF3 574 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 LIG1P18858 919 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 POLD1P28340 1107 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 RBM5P52756 815 aaKnown RBP eCLIP18.05■□□□□ 0.483e-10■■□□□ 11.6
GTF3C5-204ENST00000372108 LRSAM1Q6UWE0 723 aa18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 SRBD1Q8N5C6 995 aaKnown RBP18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 V9GY48 417 aaPredicted RBP18.05■□□□□ 0.48
GTF3C5-204ENST00000372108 MMP1P03956 469 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 TMEM47Q9BQJ4 181 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 KCNJ14Q9UNX9 436 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 CLIC4Q9Y696 253 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 COL4A5P29400 1685 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 hCG_1642624A0A1W2PR95 340 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 AKAP17AQ02040 695 aaKnown RBP18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 ZFPM1Q8IX07 1006 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 LARGE2Q8N3Y3 721 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 SHISA4Q96DD7 197 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 MAP3K14Q99558 947 aa18.04■□□□□ 0.48
GTF3C5-204ENST00000372108 CNTNAP5Q8WYK1 1306 aa18.03■□□□□ 0.48
GTF3C5-204ENST00000372108 MYH6P13533 1939 aa18.03■□□□□ 0.48
GTF3C5-204ENST00000372108 CACNB3P54284 484 aa18.03■□□□□ 0.48
GTF3C5-204ENST00000372108 POLR3EQ9NVU0 708 aa18.03■□□□□ 0.48
GTF3C5-204ENST00000372108 STX8Q9UNK0 236 aa18.03■□□□□ 0.48
GTF3C5-204ENST00000372108 PSME4Q14997 1843 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 KIF5BP33176 963 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 GNL2Q13823 731 aaKnown RBP18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 SOGA3Q5TF21 947 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 LINC00301Q8NCQ3 95 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 IDI2Q9BXS1 227 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 VPS33BQ9H267 617 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 SERPINB13Q9UIV8 391 aa18.02■□□□□ 0.48
GTF3C5-204ENST00000372108 BTBD18B2RXH4 712 aa18.02■□□□□ 0.47
GTF3C5-204ENST00000372108 NOVP48745 357 aa18.02■□□□□ 0.47
GTF3C5-204ENST00000372108 NASPP49321 788 aaPredicted RBP18.02■□□□□ 0.47
GTF3C5-204ENST00000372108 GRM4Q14833 912 aa18.02■□□□□ 0.47
GTF3C5-204ENST00000372108 UPF1Q92900 1129 aaKnown RBP eCLIP18.02■□□□□ 0.473e-8■■■■□ 20.9
GTF3C5-204ENST00000372108 CEP95Q96GE4 821 aa18.02■□□□□ 0.47
GTF3C5-204ENST00000372108 FAM198AQ9UFP1 575 aa18.02■□□□□ 0.47
GTF3C5-204ENST00000372108 RAD17O75943 681 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 RSBN1LQ6PCB5 846 aaPredicted RBP18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 DIS3L2Q8IYB7 885 aaKnown RBP18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 STAG2Q8N3U4 1231 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 SWAP70Q9UH65 585 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 MAD2L2Q9UI95 211 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 PSMD14O00487 310 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 LETM1O95202 739 aaPredicted RBP18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 YEATS4O95619 227 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 VIL1P09327 827 aaKnown RBP18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 TCP10Q12799 353 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 SAFBQ15424 915 aaKnown RBP eCLIP18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 CFAP100Q494V2 611 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 DALRD3Q5D0E6 543 aaKnown RBP18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 ANO1Q5XXA6 986 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 NOSTRINQ8IVI9 506 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 VPS54Q9P1Q0 977 aa18.01■□□□□ 0.47
GTF3C5-204ENST00000372108 PLIN4Q96Q06 1357 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
GTF3C5-204ENST00000372108 HLA-DOAP06340 250 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 AKR1B1P15121 316 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 SHMT1P34896 483 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 ME1P48163 572 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 GMLQ99445 158 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 SGIP1Q9BQI5 828 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 PANK2Q9BZ23 570 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 RBSNQ9H1K0 784 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 FOXP1Q9H334 677 aaPredicted RBP18■□□□□ 0.47
GTF3C5-204ENST00000372108 DACT1Q9NYF0 836 aa18■□□□□ 0.47
GTF3C5-204ENST00000372108 NR1I2O75469 434 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 STK38Q15208 465 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 PRMT6Q96LA8 375 aaPredicted RBP17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 EHD4Q9H223 541 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 TDRD3Q9H7E2 651 aaKnown RBP17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 IGKV6D-41A0A0C4DH26 115 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 SLURP2P0DP57 97 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 TOP1P11387 765 aaKnown RBP17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 XBP1P17861 261 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 SH3BP5LQ7L8J4 393 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 KCNG4Q8TDN1 519 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 OXER1Q8TDS5 423 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 PHF20Q9BVI0 1012 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 DHX36Q9H2U1 1008 aaKnown RBP17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 MTMR4Q9NYA4 1195 aa17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 PPP1R1BQ9UD71 204 aaPredicted RBP17.99■□□□□ 0.47
GTF3C5-204ENST00000372108 BAZ2BQ9UIF8 2168 aaKnown RBP17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 PALM3A6NDB9 673 aaPredicted RBP17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 SPTLC2O15270 562 aa17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 NR5A1Q13285 461 aa17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 SLC35G1Q2M3R5 365 aa17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 CCAR1Q8IX12 1150 aaKnown RBP17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 ZNRF3Q9ULT6 936 aa17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 BRCA1P38398 1863 aaKnown RBP17.98■□□□□ 0.47
GTF3C5-204ENST00000372108 VEGFAP15692 232 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms