RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 PLIN4Q96Q06 1357 aa21.52■■□□□ 1.04
VEGFA-206ENST00000372077 HIRAP54198 1017 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-206ENST00000372077 TNFAIP1Q13829 316 aa21.52■■□□□ 1.04
VEGFA-206ENST00000372077 TATDN1Q6P1N9 297 aa21.52■■□□□ 1.04
VEGFA-206ENST00000372077 CRACR2BQ8N4Y2 399 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-206ENST00000372077 NMT2O60551 498 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 SLURP2P0DP57 97 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 LMOD1P29536 600 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-206ENST00000372077 TMEM39BQ9GZU3 492 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 ADARB2Q9NS39 739 aaKnown RBP21.51■■□□□ 1.03
VEGFA-206ENST00000372077 CCDC69A6NI79 296 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 RCSD1Q6JBY9 416 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 NFXL1Q6ZNB6 911 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 DGKHQ86XP1 1220 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 RASA3Q14644 834 aa21.51■■□□□ 1.03
VEGFA-206ENST00000372077 HERC5Q9UII4 1024 aaKnown RBP21.51■■□□□ 1.03
VEGFA-206ENST00000372077 MYH8P13535 1937 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 GLTPD2A6NH11 291 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 NOVP48745 357 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 IFIT1BQ5T764 474 aaKnown RBP21.5■■□□□ 1.03
VEGFA-206ENST00000372077 ANP32BQ92688 251 aaKnown RBP21.5■■□□□ 1.03
VEGFA-206ENST00000372077 CCDC17Q96LX7 622 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.5■■□□□ 1.03
VEGFA-206ENST00000372077 GOLGA8BA8MQT2 603 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 RCAN1P53805 252 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 SLC12A7Q9Y666 1083 aa21.5■■□□□ 1.03
VEGFA-206ENST00000372077 NID2Q14112 1375 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 TBC1D12O60347 775 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 AKR1B1P15121 316 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 CHMP4CQ96CF2 233 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 TEPSINQ96N21 525 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 NAP1L2Q9ULW6 460 aaPredicted RBP21.49■■□□□ 1.03
VEGFA-206ENST00000372077 IGKV6D-41A0A0C4DH26 115 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
VEGFA-206ENST00000372077 MAP3K10Q02779 954 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 TRIM34Q9BYJ4 488 aa21.49■■□□□ 1.03
VEGFA-206ENST00000372077 FAM196BA6NMK8 535 aa21.48■■□□□ 1.03
VEGFA-206ENST00000372077 ZBTB43O43298 467 aa21.48■■□□□ 1.03
VEGFA-206ENST00000372077 APOBEC3FQ8IUX4 373 aaKnown RBP21.48■■□□□ 1.03
VEGFA-206ENST00000372077 LLPHQ9BRT6 129 aaKnown RBP21.48■■□□□ 1.03
VEGFA-206ENST00000372077 GREB1LQ9C091 1923 aaPredicted RBP21.48■■□□□ 1.03
VEGFA-206ENST00000372077 ANGEL2Q5VTE6 544 aaKnown RBP21.48■■□□□ 1.03
VEGFA-206ENST00000372077 SYNE3Q6ZMZ3 975 aa21.48■■□□□ 1.03
VEGFA-206ENST00000372077 CDAN1Q8IWY9 1227 aa21.48■■□□□ 1.03
VEGFA-206ENST00000372077 ZNF654Q8IZM8 581 aa21.48■■□□□ 1.03
VEGFA-206ENST00000372077 UTRNP46939 3433 aa21.48■■□□□ 1.03
VEGFA-206ENST00000372077 NCOA5Q9HCD5 579 aaKnown RBP21.47■■□□□ 1.03
VEGFA-206ENST00000372077 CERKLQ49MI3 558 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-206ENST00000372077 SMC3Q9UQE7 1217 aa21.47■■□□□ 1.03
VEGFA-206ENST00000372077 METAP2P50579 478 aaKnown RBP eCLIP21.47■■□□□ 1.037e-12■□□□□ 8.9
VEGFA-206ENST00000372077 PLCB2Q00722 1185 aa21.47■■□□□ 1.03
VEGFA-206ENST00000372077 DEFB129Q9H1M3 183 aa21.47■■□□□ 1.03
VEGFA-206ENST00000372077 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.47■■□□□ 1.033e-7■■■■■ 34.2
VEGFA-206ENST00000372077 SCAF8Q9UPN6 1271 aaKnown RBP21.47■■□□□ 1.03
VEGFA-206ENST00000372077 PITPNM2Q9BZ72 1349 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 CTDNEP1O95476 244 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 RAB11FIP4Q86YS3 637 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 SMARCC2Q8TAQ2 1214 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 MYL10Q9BUA6 226 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 FAM217BQ9NTX9 383 aaPredicted RBP21.46■■□□□ 1.03
VEGFA-206ENST00000372077 MICU3Q86XE3 530 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 GGA3Q9NZ52 723 aa21.46■■□□□ 1.03
VEGFA-206ENST00000372077 TROAPQ12815 778 aa21.45■■□□□ 1.02
VEGFA-206ENST00000372077 CATIPQ7Z7H3 387 aa21.45■■□□□ 1.02
VEGFA-206ENST00000372077 NSUN7Q8NE18 718 aaKnown RBP21.45■■□□□ 1.02
VEGFA-206ENST00000372077 MTMR4Q9NYA4 1195 aa21.45■■□□□ 1.02
VEGFA-206ENST00000372077 DHX16O60231 1041 aaKnown RBP21.45■■□□□ 1.02
VEGFA-206ENST00000372077 DDAH1O94760 285 aa21.45■■□□□ 1.02
VEGFA-206ENST00000372077 GOLGA8AA7E2F4 631 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 RXRAP19793 462 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 CDC27P30260 824 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-206ENST00000372077 GJB2P29033 226 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 RRP1BQ14684 758 aaKnown RBP21.44■■□□□ 1.02
VEGFA-206ENST00000372077 USP50Q70EL3 339 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-206ENST00000372077 TMEM47Q9BQJ4 181 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 KAT14Q9H8E8 782 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 PPP2R3BQ9Y5P8 575 aa21.44■■□□□ 1.02
VEGFA-206ENST00000372077 CALM1P0DP23 149 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 CALM2P0DP24 149 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 CALM3P0DP25 149 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 PPP2R5BQ15173 497 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 FANCBQ8NB91 859 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 SCN4AP35499 1836 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 WDR90Q96KV7 1748 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 ADD1P35611 737 aaKnown RBP21.43■■□□□ 1.02
VEGFA-206ENST00000372077 STX8Q9UNK0 236 aa21.43■■□□□ 1.02
VEGFA-206ENST00000372077 JAK2O60674 1132 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 EPHX2P34913 555 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 CNPY2Q9Y2B0 182 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 POTECB2RU33 542 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 MPHOSPH10O00566 681 aaKnown RBP21.42■■□□□ 1.02
VEGFA-206ENST00000372077 TOP1P11387 765 aaKnown RBP21.42■■□□□ 1.02
VEGFA-206ENST00000372077 NTRK3Q16288 839 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 ABCB5Q2M3G0 1257 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 PPP4R3BQ5MIZ7 849 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 PNMA1Q8ND90 353 aa21.42■■□□□ 1.02
VEGFA-206ENST00000372077 ZNF830Q96NB3 372 aaPredicted RBP21.42■■□□□ 1.02
VEGFA-206ENST00000372077 MAP3K14Q99558 947 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms