RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 TNKSO95271 1327 aa15.06■□□□□ 0
LDB3-203ENST00000372056 TPRNQ4KMQ1 711 aa15.06■□□□□ 0
LDB3-203ENST00000372056 OTUD7BQ6GQQ9 843 aa15.06■□□□□ 0
LDB3-203ENST00000372056 ANKS1AQ92625 1134 aa15.06■□□□□ 0
LDB3-203ENST00000372056 MAP3K14Q99558 947 aa15.06■□□□□ 0
LDB3-203ENST00000372056 TRIM34Q9BYJ4 488 aa15.06■□□□□ 0
LDB3-203ENST00000372056 MYH15Q9Y2K3 1946 aa15.05■□□□□ 0
LDB3-203ENST00000372056 STK36Q9NRP7 1315 aa15.05■□□□□ -0
LDB3-203ENST00000372056 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
LDB3-203ENST00000372056 FAM151AQ8WW52 585 aa15.05■□□□□ -0
LDB3-203ENST00000372056 PHKBQ93100 1093 aa15.05■□□□□ -0
LDB3-203ENST00000372056 HOOK2Q96ED9 719 aa15.05■□□□□ -0
LDB3-203ENST00000372056 ZBED3Q96IU2 234 aaPredicted RBP15.05■□□□□ -0
LDB3-203ENST00000372056 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
LDB3-203ENST00000372056 MYOZ2Q9NPC6 264 aa15.05■□□□□ -0
LDB3-203ENST00000372056 RTN4Q9NQC3 1192 aaKnown RBP15.05■□□□□ -0
LDB3-203ENST00000372056 HERC5Q9UII4 1024 aaKnown RBP15.05■□□□□ -0
LDB3-203ENST00000372056 DDX60LQ5H9U9 1706 aaKnown RBP15.04■□□□□ -0
LDB3-203ENST00000372056 COL4A5P29400 1685 aa15.04■□□□□ -0
LDB3-203ENST00000372056 PRDM1O75626 825 aa15.04■□□□□ -0
LDB3-203ENST00000372056 LETM1O95202 739 aaPredicted RBP15.04■□□□□ -0
LDB3-203ENST00000372056 TSPY3P0CV98 308 aa15.04■□□□□ -0
LDB3-203ENST00000372056 TSPY8P0CW00 308 aa15.04■□□□□ -0
LDB3-203ENST00000372056 IFNAR1P17181 557 aa15.04■□□□□ -0
LDB3-203ENST00000372056 NASPP49321 788 aaPredicted RBP15.04■□□□□ -0
LDB3-203ENST00000372056 CDK8P49336 464 aa15.04■□□□□ -0
LDB3-203ENST00000372056 RASSF7Q02833 373 aa15.04■□□□□ -0
LDB3-203ENST00000372056 EVX2Q03828 476 aa15.04■□□□□ -0
LDB3-203ENST00000372056 PICALMQ13492 652 aa15.04■□□□□ -0
LDB3-203ENST00000372056 METTL16Q86W50 562 aaKnown RBP15.04■□□□□ -0
LDB3-203ENST00000372056 ZNF654Q8IZM8 581 aa15.04■□□□□ -0
LDB3-203ENST00000372056 ENAHQ8N8S7 591 aaPredicted RBP15.04■□□□□ -0
LDB3-203ENST00000372056 PRMT6Q96LA8 375 aaPredicted RBP15.04■□□□□ -0
LDB3-203ENST00000372056 ALG1Q9BT22 464 aa15.04■□□□□ -0
LDB3-203ENST00000372056 RBSNQ9H1K0 784 aa15.04■□□□□ -0
LDB3-203ENST00000372056 GJB4Q9NTQ9 266 aa15.04■□□□□ -0
LDB3-203ENST00000372056 CYP2D6P10635 497 aa15.03■□□□□ -0
LDB3-203ENST00000372056 GABPAQ06546 454 aa15.03■□□□□ -0
LDB3-203ENST00000372056 RTN1Q16799 776 aa15.03■□□□□ -0
LDB3-203ENST00000372056 IFIT1BQ5T764 474 aaKnown RBP15.03■□□□□ -0
LDB3-203ENST00000372056 DPY19L2Q6NUT2 758 aa15.03■□□□□ -0
LDB3-203ENST00000372056 CATIPQ7Z7H3 387 aa15.03■□□□□ -0
LDB3-203ENST00000372056 NEDD1Q8NHV4 660 aa15.03■□□□□ -0
LDB3-203ENST00000372056 PGBD1Q96JS3 809 aa15.03■□□□□ -0
LDB3-203ENST00000372056 USP28Q96RU2 1077 aa15.03■□□□□ -0
LDB3-203ENST00000372056 ZNF70Q9UC06 446 aaPredicted RBP15.03■□□□□ -0
LDB3-203ENST00000372056 RCOR1Q9UKL0 485 aa15.03■□□□□ -0
LDB3-203ENST00000372056 GOLGA6L4A6NEF3 574 aa15.03■□□□□ -0
LDB3-203ENST00000372056 DDAH1O94760 285 aa15.03■□□□□ -0
LDB3-203ENST00000372056 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
LDB3-203ENST00000372056 PLCD1P51178 756 aa15.03■□□□□ -0
LDB3-203ENST00000372056 BRAPQ7Z569 592 aa15.03■□□□□ -0
LDB3-203ENST00000372056 CRACR2BQ8N4Y2 399 aaPredicted RBP15.03■□□□□ -0
LDB3-203ENST00000372056 AIFM3Q96NN9 605 aa15.03■□□□□ -0
LDB3-203ENST00000372056 FTOQ9C0B1 505 aaKnown RBP eCLIP15.03■□□□□ -0
LDB3-203ENST00000372056 TSPY26PQ9H489 355 aa15.03■□□□□ -0
LDB3-203ENST00000372056 TDRD3Q9H7E2 651 aaKnown RBP15.03■□□□□ -0
LDB3-203ENST00000372056 RBM28Q9NW13 759 aaKnown RBP15.03■□□□□ -0
LDB3-203ENST00000372056 SAP30BPQ9UHR5 308 aaKnown RBP15.03■□□□□ -0
LDB3-203ENST00000372056 CNOT7Q9UIV1 285 aaKnown RBP15.03■□□□□ -0
LDB3-203ENST00000372056 ZBTB12Q9Y330 459 aaPredicted RBP15.03■□□□□ -0
LDB3-203ENST00000372056 LIG1P18858 919 aa15.02■□□□□ -0
LDB3-203ENST00000372056 TFAP4Q01664 338 aa15.02■□□□□ -0
LDB3-203ENST00000372056 KIF23Q02241 960 aaPredicted RBP15.02■□□□□ -0
LDB3-203ENST00000372056 CEBPZQ03701 1054 aaKnown RBP15.02■□□□□ -0
LDB3-203ENST00000372056 FANCBQ8NB91 859 aa15.02■□□□□ -0
LDB3-203ENST00000372056 PLIN4Q96Q06 1357 aa15.02□□□□□ -0.01
LDB3-203ENST00000372056 TBC1D12O60347 775 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 GMPSP49915 693 aaPredicted RBP15.01□□□□□ -0.01
LDB3-203ENST00000372056 SSRP1Q08945 709 aaKnown RBP15.01□□□□□ -0.01
LDB3-203ENST00000372056 ZSCAN29Q8IWY8 852 aaPredicted RBP15.01□□□□□ -0.01
LDB3-203ENST00000372056 SLC26A6Q9BXS9 759 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 DDX4Q9NQI0 724 aaKnown RBP15.01□□□□□ -0.01
LDB3-203ENST00000372056 GINM1Q9NU53 330 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 FAM198AQ9UFP1 575 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 KIF28PB7ZC32 967 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 RASA1P20936 1047 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 KIF5BP33176 963 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 GNAQP50148 359 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 KRT40Q6A162 431 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 NBPF11Q86T75 865 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 WASF1Q92558 559 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 RTEL1Q9NZ71 1219 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 SYNPO2Q9UMS6 1093 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 PPP2R3BQ9Y5P8 575 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 GJA3Q9Y6H8 435 aa15.01□□□□□ -0.01
LDB3-203ENST00000372056 SBF1O95248 1867 aa15□□□□□ -0.01
LDB3-203ENST00000372056 WNT10BO00744 389 aa15□□□□□ -0.01
LDB3-203ENST00000372056 LMOD1P29536 600 aaPredicted RBP15□□□□□ -0.01
LDB3-203ENST00000372056 GPR162Q16538 588 aa15□□□□□ -0.01
LDB3-203ENST00000372056 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
LDB3-203ENST00000372056 APOBEC3FQ8IUX4 373 aaKnown RBP15□□□□□ -0.01
LDB3-203ENST00000372056 MICALL2Q8IY33 904 aa15□□□□□ -0.01
LDB3-203ENST00000372056 NUP133Q8WUM0 1156 aa15□□□□□ -0.01
LDB3-203ENST00000372056 UBE2Q2LH0YL09 131 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 TRIM22Q8IYM9 498 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 LZTS2Q9BRK4 669 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 KAT14Q9H8E8 782 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 DACT1Q9NYF0 836 aa14.99□□□□□ -0.01
LDB3-203ENST00000372056 GPRC5DQ9NZD1 345 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms