RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 CCDC70Q6NSX1 233 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 ACTN4O43707 911 aaKnown RBP16.22■□□□□ 0.19
PHTF1-204ENST00000369604 RILPL1Q5EBL4 403 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 TBC1D10CQ8IV04 446 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 TRIM22Q8IYM9 498 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 CABP5Q9NP86 173 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 MED1Q15648 1581 aaPredicted RBP16.22■□□□□ 0.19
PHTF1-204ENST00000369604 CPDO75976 1380 aa16.22■□□□□ 0.19
PHTF1-204ENST00000369604 RNF225M0QZC1 329 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 IFIT3O14879 490 aaKnown RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 ELOA2Q8IYF1 753 aaPredicted RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 NKX2-3Q8TAU0 364 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 RUFY1Q96T51 708 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 KIAA0754O94854 1291 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 GUCY1A2P33402 732 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 PBX1P40424 430 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 KRT31Q15323 416 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 SWT1Q5T5J6 900 aaKnown RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 SND1Q7KZF4 910 aaKnown RBP eCLIP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 WASF1Q92558 559 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 GPR108Q9NPR9 543 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 JADE2Q9NQC1 790 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 INCENPQ9NQS7 918 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 GNL3LQ9NVN8 582 aaKnown RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 CEP131Q9UPN4 1083 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 CAPN7Q9Y6W3 813 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 FOXO4P98177 505 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 CKAP4Q07065 602 aaKnown RBP16.21■□□□□ 0.19
PHTF1-204ENST00000369604 RRAGBQ5VZM2 374 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 KCNH5Q8NCM2 988 aa16.21■□□□□ 0.19
PHTF1-204ENST00000369604 NDUFA10O95299 355 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 SNRPA1P09661 255 aaKnown RBP16.2■□□□□ 0.18
PHTF1-204ENST00000369604 UBXN1Q04323 297 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 SCARF1Q14162 830 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 RRP12Q5JTH9 1297 aaKnown RBP16.2■□□□□ 0.18
PHTF1-204ENST00000369604 NBPF14Q5TI25 921 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 TRAPPC11Q7Z392 1133 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 JAKMIP2Q96AA8 810 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 NBPF3Q9H094 633 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 MYBL2P10244 700 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 ATP6V1AP38606 617 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 MMP1P03956 469 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 MATR3P43243 847 aaKnown RBP eCLIP16.2■□□□□ 0.18
PHTF1-204ENST00000369604 FKBP15Q5T1M5 1219 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 ANKRD18AQ8IVF6 992 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 MAPK8IP1Q9UQF2 711 aa16.2■□□□□ 0.18
PHTF1-204ENST00000369604 SRPRBQ9Y5M8 271 aaKnown RBP16.2■□□□□ 0.18
PHTF1-204ENST00000369604 PLEKHG1Q9ULL1 1385 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 NDUFAB1O14561 156 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 IPO7O95373 1038 aaKnown RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 MRPS25P82663 173 aaKnown RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 CDKAL1Q5VV42 579 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 C2orf54Q08AI8 447 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 CUL4BQ13620 913 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 NTRK3Q16288 839 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 OTUD6BQ8N6M0 293 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 PAGE5Q96GU1 130 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 BLZF1Q9H2G9 400 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 HAUS4Q9H6D7 363 aa16.19■□□□□ 0.18
PHTF1-204ENST00000369604 RGPD8O14715 1765 aaPredicted RBP16.19■□□□□ 0.18
PHTF1-204ENST00000369604 ZNF185O15231 689 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
PHTF1-204ENST00000369604 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
PHTF1-204ENST00000369604 SLC52A2Q9HAB3 445 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 CWC25Q9NXE8 425 aaPredicted RBP16.18■□□□□ 0.18
PHTF1-204ENST00000369604 AGPSO00116 658 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 ZEB2O60315 1214 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 CCDC57Q2TAC2 916 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 AIDAQ96BJ3 306 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 TMEM87BQ96K49 555 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
PHTF1-204ENST00000369604 WDR19Q8NEZ3 1342 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
PHTF1-204ENST00000369604 CASP7P55210 303 aa16.17■□□□□ 0.18
PHTF1-204ENST00000369604 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
PHTF1-204ENST00000369604 OXER1Q8TDS5 423 aa16.17■□□□□ 0.18
PHTF1-204ENST00000369604 LUC7L2Q9Y383 392 aaKnown RBP16.17■□□□□ 0.18
PHTF1-204ENST00000369604 MACROD2A1Z1Q3 448 aa16.17■□□□□ 0.18
PHTF1-204ENST00000369604 EIF3HO15372 352 aaKnown RBP eCLIP16.17■□□□□ 0.18
PHTF1-204ENST00000369604 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
PHTF1-204ENST00000369604 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
PHTF1-204ENST00000369604 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
PHTF1-204ENST00000369604 ITIH6Q6UXX5 1313 aa16.16■□□□□ 0.18
PHTF1-204ENST00000369604 DIP2AQ14689 1571 aa16.16■□□□□ 0.18
PHTF1-204ENST00000369604 A0A087X0B3 334 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms