RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CNOT7Q9UIV1 285 aaKnown RBP8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 ZFHX4Q86UP3 3567 aa8.15□□□□□ -1.1
ECHDC1-202ENST00000368289 KIF24Q5T7B8 1368 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 MAPK8IP3Q9UPT6 1336 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 YDJCA8MPS7 323 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 AOC3Q16853 763 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 C16orf46Q6P387 395 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 NLRP8Q86W28 1048 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 RUNDC1Q96C34 613 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 GPAMQ9HCL2 828 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 SCN7AQ01118 1682 aa8.14□□□□□ -1.11
ECHDC1-202ENST00000368289 SYNGAP1Q96PV0 1343 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 RAD17O75943 681 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 ITGA6P23229 1130 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 ST5P78524 1137 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 C11orf91Q3C1V1 193 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 TBC1D10BQ4KMP7 808 aaPredicted RBP8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 FIGNL1Q6PIW4 674 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 MORC1Q86VD1 984 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 AEBP1Q8IUX7 1158 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 DPF3Q92784 378 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 CDCA5Q96FF9 252 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 SETDB2Q96T68 719 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 REV3LO60673 3130 aa8.13□□□□□ -1.11
ECHDC1-202ENST00000368289 ZNF609O15014 1411 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 A0A1W2PNR3 127 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 UBE2Q2LH0YL09 131 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 APAF1O14727 1248 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 ATP4AP20648 1035 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 BRD2P25440 801 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 MTHFSP49914 203 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 NAA30Q147X3 362 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 CRY2Q49AN0 593 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 ZNF530Q6P9A1 599 aaPredicted RBP8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 NIM1KQ8IY84 436 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 CD99L2Q8TCZ2 262 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 NUCKS1Q9H1E3 243 aaKnown RBP8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 RUBCNLQ9H714 662 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 LGR6Q9HBX8 967 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 ZNRF3Q9ULT6 936 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 C5orf42Q9H799 3197 aa8.12□□□□□ -1.11
ECHDC1-202ENST00000368289 HSP90AB1P08238 724 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-202ENST00000368289 EIF4A2Q14240 407 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-202ENST00000368289 MYH16Q9H6N6 1097 aa8.11□□□□□ -1.11
ECHDC1-202ENST00000368289 EGFL7Q9UHF1 273 aa8.11□□□□□ -1.11
ECHDC1-202ENST00000368289 SCAF8Q9UPN6 1271 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-202ENST00000368289 GNEQ9Y223 722 aaKnown RBP8.11□□□□□ -1.11
ECHDC1-202ENST00000368289 IL16Q14005 1332 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 CDHR2Q9BYE9 1310 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 MAP3K12Q12852 859 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 COX20Q5RI15 118 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 SV2AQ7L0J3 742 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 GTF3C2Q8WUA4 911 aaPredicted RBP8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 GDF15Q99988 308 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 CHMP4BQ9H444 224 aaKnown RBP8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 SEPT3Q9UH03 358 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 PTCH2Q9Y6C5 1203 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
ECHDC1-202ENST00000368289 PRAMEF22A3QJZ6 481 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 IGF2BP3O00425 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 EIF5BO60841 1220 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 ABL1P00519 1130 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 IER5Q5VY09 327 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 NBPF5PQ86XG9 351 aaPredicted RBP8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 HELQQ8TDG4 1101 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 NANOS1Q8WY41 292 aaKnown RBP8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 SUSD3Q96L08 255 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 KCNQ5Q9NR82 932 aa8.09□□□□□ -1.11
ECHDC1-202ENST00000368289 RPTORQ8N122 1335 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 A0A087WZG4 1122 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 CDC14CA4D256 554 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 TGFBR3LH3BV60 316 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 A1BGP04217 495 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 ALDH1B1P30837 517 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 HOXA10P31260 410 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 DBN1Q16643 649 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 LRIT3Q3SXY7 679 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 SAMD5Q5TGI4 173 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 PRAMEF18Q5VWM3 479 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 LRRC69Q6ZNQ3 347 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 SH3TC2Q8TF17 1288 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 IFT43Q96FT9 208 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 BCL2L13Q9BXK5 485 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 RTFDC1Q9BY42 306 aaPredicted RBP8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 EFCC1Q9HA90 598 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 FAM13BQ9NYF5 915 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 STIM2Q9P246 746 aa8.08□□□□□ -1.12
ECHDC1-202ENST00000368289 TERTO14746 1132 aaKnown RBP8.07□□□□□ -1.12
ECHDC1-202ENST00000368289 PLIN1O60240 522 aa8.07□□□□□ -1.12
ECHDC1-202ENST00000368289 FAM13AO94988 1023 aa8.07□□□□□ -1.12
ECHDC1-202ENST00000368289 DEKP35659 375 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms