RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 GH2P01242 217 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 SHMT1P34896 483 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 BACE1P56817 501 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 ABCB5Q2M3G0 1257 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 SBK1Q52WX2 424 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 ZMYM1Q5SVZ6 1142 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 CTR9Q6PD62 1173 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 C17orf99Q6UX52 265 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 GADL1Q6ZQY3 521 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 PROCA1Q8NCQ7 364 aaPredicted RBP11.82□□□□□ -0.52
CD48-202ENST00000368046 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 KRTAP3-2Q9BYR7 98 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 SWAP70Q9UH65 585 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 ZBTB21Q9ULJ3 1066 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 SLC45A1Q9Y2W3 748 aa11.82□□□□□ -0.52
CD48-202ENST00000368046 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
CD48-202ENST00000368046 GPAA1O43292 621 aa11.81□□□□□ -0.52
CD48-202ENST00000368046 APPP05067 770 aa11.81□□□□□ -0.52
CD48-202ENST00000368046 CYP2D6P10635 497 aa11.81□□□□□ -0.52
CD48-202ENST00000368046 IFNLR1Q8IU57 520 aaPredicted RBP11.81□□□□□ -0.52
CD48-202ENST00000368046 ABHD8Q96I13 439 aa11.81□□□□□ -0.52
CD48-202ENST00000368046 SEC62Q99442 399 aaKnown RBP11.81□□□□□ -0.52
CD48-202ENST00000368046 AGTPBP1Q9UPW5 1226 aa11.81□□□□□ -0.52
CD48-202ENST00000368046 TRIM6-TRIM34B2RNG4 842 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 M0R2C6 588 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 CYP2C8P10632 490 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 CDK8P49336 464 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 HMGCS2P54868 508 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
CD48-202ENST00000368046 SHROOM1Q2M3G4 852 aaPredicted RBP11.8□□□□□ -0.52
CD48-202ENST00000368046 IFNL3Q8IZI9 196 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 CCDC17Q96LX7 622 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 HELLSQ9NRZ9 838 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 TMOD4Q9NZQ9 345 aa11.8□□□□□ -0.52
CD48-202ENST00000368046 ARPP21Q9UBL0 812 aaPredicted RBP11.8□□□□□ -0.52
CD48-202ENST00000368046 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 MPHOSPH10O00566 681 aaKnown RBP11.79□□□□□ -0.52
CD48-202ENST00000368046 OSBPP22059 807 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 KIF22Q14807 665 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 C16orf86Q6ZW13 317 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 CD99L2Q8TCZ2 262 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 HS3ST6Q96QI5 342 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 PARK7Q99497 189 aaKnown RBP11.79□□□□□ -0.52
CD48-202ENST00000368046 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 EFCC1Q9HA90 598 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 CPA4Q9UI42 421 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 TRIM17Q9Y577 477 aa11.79□□□□□ -0.52
CD48-202ENST00000368046 POTEB3A0JP26 581 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 MINDY4BA8MYZ0 360 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 SMIM22K7EJ46 135 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
CD48-202ENST00000368046 GUCY1A2P33402 732 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 USP14P54578 494 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 LACTBP83111 547 aaPredicted RBP11.78□□□□□ -0.52
CD48-202ENST00000368046 MTMR2Q13614 643 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 SEPT2Q15019 361 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 MCMDC2Q4G0Z9 681 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 FBXO46Q6PJ61 603 aaPredicted RBP11.78□□□□□ -0.52
CD48-202ENST00000368046 USP17L2Q6R6M4 530 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 POTEBQ6S5H4 581 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 TMEM179Q6ZVK1 233 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 OTOP1Q7RTM1 612 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 PNMA3Q9UL41 463 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 CASP8AP2Q9UKL3 1982 aa11.78□□□□□ -0.52
CD48-202ENST00000368046 LAMB1P07942 1786 aa11.77□□□□□ -0.52
CD48-202ENST00000368046 FAM205CA6NFA0 338 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 GNRH1P01148 92 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 BCRP11274 1271 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 SDSP20132 328 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 PDE4AP27815 886 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 TDO2P48775 406 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 SMCR8Q8TEV9 937 aaPredicted RBP11.77□□□□□ -0.53
CD48-202ENST00000368046 KIAA1683Q9H0B3 1180 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 ASCC2Q9H1I8 757 aaPredicted RBP11.77□□□□□ -0.53
CD48-202ENST00000368046 MKNK2Q9HBH9 465 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 ZNF287Q9HBT7 754 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 EPB41L4AQ9HCS5 686 aaPredicted RBP11.77□□□□□ -0.53
CD48-202ENST00000368046 ADGRA2Q96PE1 1338 aa11.77□□□□□ -0.53
CD48-202ENST00000368046 FOCADQ5VW36 1801 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 CCDC85CA6NKD9 419 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 GCLCP48506 637 aaPredicted RBP11.76□□□□□ -0.53
CD48-202ENST00000368046 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 ZNF444Q8N0Y2 327 aaPredicted RBP11.76□□□□□ -0.53
CD48-202ENST00000368046 ACER1Q8TDN7 264 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 C12orf42Q96LP6 360 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 FAM227BQ96M60 508 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 P2RX7Q99572 595 aaKnown RBP11.76□□□□□ -0.53
CD48-202ENST00000368046 NAPBQ9H115 298 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 PTPN22Q9Y2R2 807 aa11.76□□□□□ -0.53
CD48-202ENST00000368046 SIPA1L1O43166 1804 aa11.75□□□□□ -0.53
CD48-202ENST00000368046 CDK5RAP2Q96SN8 1893 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms