RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 H2AFXP16104 143 aaPredicted RBP14.03□□□□□ -0.16
PTPN7-202ENST00000367279 MCM7P33993 719 aa14.03□□□□□ -0.16
PTPN7-202ENST00000367279 NLRP5P59047 1200 aa14.03□□□□□ -0.16
PTPN7-202ENST00000367279 EVX2Q03828 476 aa14.03□□□□□ -0.16
PTPN7-202ENST00000367279 FILIP1LQ4L180 1135 aa14.03□□□□□ -0.16
PTPN7-202ENST00000367279 TMEM139Q8IV31 216 aa14.03□□□□□ -0.16
PTPN7-202ENST00000367279 CCDC24Q8N4L8 307 aa14.03□□□□□ -0.16
PTPN7-202ENST00000367279 PUF60Q9UHX1 559 aaKnown RBP14.03□□□□□ -0.16
PTPN7-202ENST00000367279 ADAMTS2O95450 1211 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 PNMA6AP0CW24 399 aaPredicted RBP14.02□□□□□ -0.16
PTPN7-202ENST00000367279 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.16
PTPN7-202ENST00000367279 KCNQ4P56696 695 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 RBL2Q08999 1139 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 PIK3AP1Q6ZUJ8 805 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 SMIM5Q71RC9 77 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 PAGE5Q96GU1 130 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 MED15Q96RN5 788 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 PAPPAQ13219 1627 aa14.02□□□□□ -0.16
PTPN7-202ENST00000367279 USP17L12C9JPN9 530 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 USP17L21D6R901 530 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 CDC25AP30304 524 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 CAVIN4Q5BKX8 364 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 RRAGBQ5VZM2 374 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 RNF26Q9BY78 433 aaPredicted RBP14.02□□□□□ -0.17
PTPN7-202ENST00000367279 PNPLA7Q6ZV29 1317 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 BCL9O00512 1426 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 A0A0U1RQJ8 604 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 TADA3O75528 432 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 CCDC175P0C221 793 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 PTGDRQ13258 359 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 TTC38Q5R3I4 469 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 ANKRD18AQ8IVF6 992 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 CTCFLQ8NI51 663 aaPredicted RBP14.02□□□□□ -0.17
PTPN7-202ENST00000367279 ATRIPQ8WXE1 791 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 SRRTQ9BXP5 876 aaKnown RBP14.02□□□□□ -0.17
PTPN7-202ENST00000367279 VPS16Q9H269 839 aa14.02□□□□□ -0.17
PTPN7-202ENST00000367279 MRPL44Q9H9J2 332 aaKnown RBP14.02□□□□□ -0.17
PTPN7-202ENST00000367279 NUP98P52948 1817 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 ECM29Q5VYK3 1845 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 MYO1BO43795 1136 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 ZNF18P17022 549 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 SHISA4Q96DD7 197 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 CDC5LQ99459 802 aaKnown RBP14.01□□□□□ -0.17
PTPN7-202ENST00000367279 AATFQ9NY61 560 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTPN7-202ENST00000367279 GOLGA6L9A6NEM1 432 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 SARSP49591 514 aaKnown RBP14.01□□□□□ -0.17
PTPN7-202ENST00000367279 EIF5P55010 431 aaKnown RBP14.01□□□□□ -0.17
PTPN7-202ENST00000367279 TBX2Q13207 712 aaPredicted RBP14.01□□□□□ -0.17
PTPN7-202ENST00000367279 FCHSD1Q86WN1 690 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 TRIML1Q8N9V2 468 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 CHD4Q14839 1912 aa14.01□□□□□ -0.17
PTPN7-202ENST00000367279 EFCAB8A8MWE9 144 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 N4BP3O15049 544 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 TPM1P09493 284 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
PTPN7-202ENST00000367279 PLIN2Q99541 437 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 TFCP2L1Q9NZI6 479 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 FHOD1Q9Y613 1164 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 CASP14P31944 242 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 NR1I3Q14994 352 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 SEC23AQ15436 765 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 PKN1Q16512 942 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 ZNF569Q5MCW4 686 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 SPATA1Q5VX52 437 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 INTS5Q6P9B9 1019 aaKnown RBP14□□□□□ -0.17
PTPN7-202ENST00000367279 SHANK3Q9BYB0 1731 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 KIF4BQ2VIQ3 1234 aa14□□□□□ -0.17
PTPN7-202ENST00000367279 NUP88Q99567 741 aaPredicted RBP14□□□□□ -0.17
PTPN7-202ENST00000367279 ERFEQ4G0M1 354 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 RGS22Q8NE09 1264 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 TAB2Q9NYJ8 693 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 MYH2Q9UKX2 1941 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 KIF5CO60282 957 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 CYP2D6P10635 497 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 ERCC5P28715 1186 aaPredicted RBP13.99□□□□□ -0.17
PTPN7-202ENST00000367279 SIK1P57059 783 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 PARP10Q53GL7 1025 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 RAD9BQ6WBX8 426 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 PHF20Q9BVI0 1012 aa13.99□□□□□ -0.17
PTPN7-202ENST00000367279 NT5DC1Q5TFE4 455 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 ITGB4P16144 1822 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 A0A1B0GTH6 734 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 DDB1Q16531 1140 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 ACRBPQ8NEB7 543 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 RASGRP4Q8TDF6 673 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
PTPN7-202ENST00000367279 PRPF3O43395 683 aaKnown RBP13.98□□□□□ -0.17
PTPN7-202ENST00000367279 NTSR2O95665 410 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 VEGFAP15692 232 aaPredicted RBP13.98□□□□□ -0.17
PTPN7-202ENST00000367279 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 ITPK1Q13572 414 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 GPKOWQ92917 476 aaPredicted RBP eCLIP13.98□□□□□ -0.17
PTPN7-202ENST00000367279 ZCCHC17Q9NP64 241 aaKnown RBP13.98□□□□□ -0.17
PTPN7-202ENST00000367279 MYH6P13533 1939 aa13.98□□□□□ -0.17
PTPN7-202ENST00000367279 MAP3K9P80192 1104 aa13.97□□□□□ -0.17
PTPN7-202ENST00000367279 CUL4BQ13620 913 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms