RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CAVIN2O95810 425 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 TUBB4AP04350 444 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 CCT6AP40227 531 aaKnown RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 APOBRQ0VD83 1088 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 COPS6Q7L5N1 327 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 ERO1AQ96HE7 468 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 GAS2L1Q99501 681 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 NUP88Q99567 741 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 FBXO9Q9UK97 447 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 CTAGE15A4D2H0 777 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 DNAJC8O75937 253 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 CTAGE8P0CG41 777 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 PAX3P23760 479 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 SSTR3P32745 418 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 EN1Q05925 392 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 TCERG1LQ5VWI1 586 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 TTC30AQ86WT1 665 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 CTAGE4Q8IX94 777 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 CPXCR1Q8N123 301 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 GPR101Q96P66 508 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 STMN4Q9H169 189 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 NPHP4O75161 1426 aaPredicted RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 ZBTB16Q05516 673 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 EIF2B5Q13144 721 aaKnown RBP9.58□□□□□ -0.88
SYNE1-206ENST00000367253 TRPC3Q13507 836 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 FLOT2Q14254 428 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 CHST3Q7LGC8 479 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 ARMC2Q8NEN0 867 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 NKX2-3Q8TAU0 364 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 TBC1D5Q92609 795 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
SYNE1-206ENST00000367253 TMEM2Q9UHN6 1383 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 AGLP35573 1532 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 PPP1R12AO14974 1030 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 TUBB4BP68371 445 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 SETDB1Q15047 1291 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 SDCCAG8Q86SQ7 713 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 SPATS2Q86XZ4 545 aaKnown RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 USP33Q8TEY7 942 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 H0YC42 278 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 HUNKP57058 714 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 IRX1P78414 480 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 MAP7Q14244 749 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 PDCD2Q16342 344 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 TDRD12Q587J7 1177 aaKnown RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 CACNA2D3Q8IZS8 1091 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 MSRAQ9UJ68 235 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 YTHDC2Q9H6S0 1430 aaKnown RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 PPEF1O14829 653 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 CETN3O15182 167 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 SERPINB2P05120 415 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 BCAMP50895 628 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 TTC22Q5TAA0 569 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 TMC6Q7Z403 805 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 CHCHD4Q8N4Q1 142 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 FNBP1Q96RU3 617 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 CARD10Q9BWT7 1032 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 DDX19AQ9NUU7 478 aaKnown RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 MAP3K20Q9NYL2 800 aaKnown RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 COL17A1Q9UMD9 1497 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 ERVV-2B6SEH9 535 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 H0YCG3 227 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 PDE8AO60658 829 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 FAM13AO94988 1023 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 ERCC3P19447 782 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 AMPD2Q01433 879 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 GOLGA8FQ08AF8 430 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 GOLGA8DPQ0D2H9 430 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 HAUS6Q7Z4H7 955 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 BBS5Q8N3I7 341 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 N4BP2L2Q92802 583 aaPredicted RBP9.57□□□□□ -0.88
SYNE1-206ENST00000367253 SAAL1Q96ER3 474 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 CXorf56Q9H5V9 222 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 NRBP2Q9NSY0 501 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 SLC4A4Q9Y6R1 1079 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 ATP8B3O60423 1300 aa9.57□□□□□ -0.88
SYNE1-206ENST00000367253 NAPAP54920 295 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 YWHAEP62258 255 aaKnown RBP9.56□□□□□ -0.88
SYNE1-206ENST00000367253 TMED1Q13445 227 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 PLCB4Q15147 1175 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 IFIT1BQ5T764 474 aaKnown RBP9.56□□□□□ -0.88
SYNE1-206ENST00000367253 OTUD6AQ7L8S5 288 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 CPLX4Q7Z7G2 160 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 IP6K1Q92551 441 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 SEPT10Q9P0V9 454 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 ODF2LQ9ULJ1 636 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 TTF2Q9UNY4 1162 aaKnown RBP9.56□□□□□ -0.88
SYNE1-206ENST00000367253 CASQ2O14958 399 aaPredicted RBP9.56□□□□□ -0.88
SYNE1-206ENST00000367253 PFDN6O15212 129 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 CUL4BQ13620 913 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 POTEDQ86YR6 584 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 JADE2Q9NQC1 790 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 FBXO40Q9UH90 709 aa9.56□□□□□ -0.88
SYNE1-206ENST00000367253 MMP10P09238 476 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms