RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 STK24Q9Y6E0 443 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 PABPC4Q13310 644 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 HLTFQ14527 1009 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 GPIHBP1Q8IV16 184 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 CCDC17Q96LX7 622 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 FERMT1Q9BQL6 677 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 PFKFB2O60825 505 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 PCP11498 1178 aaKnown RBP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 ADD1P35611 737 aaKnown RBP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 ANTXR1Q9H6X2 564 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 LUC7L2Q9Y383 392 aaKnown RBP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 CIAPIN1Q6FI81 312 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 PI16Q6UXB8 463 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 CDC37L1Q7L3B6 337 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 SUGCTQ9HAC7 445 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 NARFQ9UHQ1 456 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 MAPK8IP1Q9UQF2 711 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 XRCC6P12956 609 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNE1-204ENST00000367248 DNM2P50570 870 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 UBXN2AP68543 259 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 ZSWIM6Q9HCJ5 1215 aa12.98□□□□□ -0.33
SYNE1-204ENST00000367248 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 RAPGEF1Q13905 1077 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 CLSTN2Q9H4D0 955 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 IFNKQ9P0W0 207 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 SLFN13Q68D06 897 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 APBB1IPQ7Z5R6 666 aaPredicted RBP12.97□□□□□ -0.33
SYNE1-204ENST00000367248 ATP10DQ9P241 1426 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 POTEB2H3BUK9 544 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 KRT83P78385 493 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 CNNM4Q6P4Q7 775 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 NLRX1Q86UT6 975 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 CPSF1Q10570 1443 aaKnown RBP12.97□□□□□ -0.33
SYNE1-204ENST00000367248 KRT9P35527 623 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 TACC1O75410 805 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 IFRD2Q12894 506 aaPredicted RBP12.97□□□□□ -0.33
SYNE1-204ENST00000367248 DYDC1Q8WWB3 177 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 PLCB3Q01970 1234 aa12.97□□□□□ -0.33
SYNE1-204ENST00000367248 ZNF277Q9NRM2 450 aaPredicted RBP12.97□□□□□ -0.33
SYNE1-204ENST00000367248 ADCY10Q96PN6 1610 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 TMEM232C9JQI7 657 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 ARHGEF6Q15052 776 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 SUPT20HL1Q3ZLR7 823 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 HERC4Q5GLZ8 1057 aaPredicted RBP12.96□□□□□ -0.33
SYNE1-204ENST00000367248 SPON1Q9HCB6 807 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 GOLGA6L10A0A0M3HER8 536 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 NPR1P16066 1061 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 CACNB3P54284 484 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 TRPC3Q13507 836 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.33
SYNE1-204ENST00000367248 ABCB5Q2M3G0 1257 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 SESTD1Q86VW0 696 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 TPH2Q8IWU9 490 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 DDAH1O94760 285 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 BRD1O95696 1058 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 PNMA2Q9UL42 364 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 DNM3Q9UQ16 869 aa12.96□□□□□ -0.33
SYNE1-204ENST00000367248 CETN3O15182 167 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 IGKV5-2P06315 115 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 CCDC175P0C221 793 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 PRPHP41219 470 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 KCTD2Q14681 263 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 LSG1Q9H089 658 aaKnown RBP12.96□□□□□ -0.34
SYNE1-204ENST00000367248 HLFQ16534 295 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 CCDC50Q8IVM0 306 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 BSDC1Q9NW68 430 aaPredicted RBP12.96□□□□□ -0.34
SYNE1-204ENST00000367248 FRMD4BQ9Y2L6 1034 aa12.96□□□□□ -0.34
SYNE1-204ENST00000367248 POLR2DO15514 142 aaKnown RBP12.95□□□□□ -0.34
SYNE1-204ENST00000367248 ADRA2BP18089 450 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 KIF5AQ12840 1032 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 POLA2Q14181 598 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 CALCRLQ16602 461 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 KIAA0753Q2KHM9 967 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 MCTP2Q6DN12 878 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 ZSWIM4Q9H7M6 989 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 APOL6Q9BWW8 343 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 EXOC7Q9UPT5 735 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 CYP21A2P08686 494 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 DYMQ7RTS9 669 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 ZNF830Q96NB3 372 aaPredicted RBP12.95□□□□□ -0.34
SYNE1-204ENST00000367248 TPCN1Q9ULQ1 816 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 C1orf167Q5SNV9 1468 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 KRT86O43790 486 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 SASH1O94885 1247 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 BIRC2Q13490 618 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 NOSTRINQ8IVI9 506 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 MLKLQ8NB16 471 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
SYNE1-204ENST00000367248 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
SYNE1-204ENST00000367248 SCG2P13521 617 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 TBC1D8BQ0IIM8 1120 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 ZHX1Q9UKY1 873 aaPredicted RBP12.95□□□□□ -0.34
SYNE1-204ENST00000367248 JCADQ9P266 1359 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 TXNRD1Q16881 649 aa12.95□□□□□ -0.34
SYNE1-204ENST00000367248 CABP7Q86V35 215 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms