RNA–Protein interactions for RNA: ENST00000366856.3

CNIH4-201, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH4, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-201ENST00000366856 CPSF6Q16630 551 aaKnown RBP eCLIP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 LRRFIP1Q32MZ4 808 aaKnown RBP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 SFRP5Q5T4F7 317 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 RUFY4Q6ZNE9 571 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 SLFN12Q8IYM2 578 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 PLD6Q8N2A8 252 aaKnown RBP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 RASGRP4Q8TDF6 673 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 ATG4CQ96DT6 458 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 HEXIM2Q96MH2 286 aaKnown RBP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 SRRTQ9BXP5 876 aaKnown RBP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 PCMTD2Q9NV79 361 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 USP35Q9P2H5 1018 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 ZC3H7BQ9UGR2 993 aaKnown RBP6.92□□□□□ -1.3
CNIH4-201ENST00000366856 MRVI1Q9Y6F6 885 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 U3KQE9 123 aa6.92□□□□□ -1.3
CNIH4-201ENST00000366856 CYP7A1P22680 504 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 SOX9P48436 509 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 EIF6P56537 245 aaKnown RBP6.91□□□□□ -1.3
CNIH4-201ENST00000366856 ZC3H6P61129 1189 aaKnown RBP6.91□□□□□ -1.3
CNIH4-201ENST00000366856 COL9A2Q14055 689 aaPredicted RBP6.91□□□□□ -1.3
CNIH4-201ENST00000366856 PPP2R5EQ16537 467 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 NAALADL2Q58DX5 795 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 CDKAL1Q5VV42 579 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 TINF2Q9BSI4 451 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 FAM86C1Q9NVL1 165 aa6.91□□□□□ -1.3
CNIH4-201ENST00000366856 PRR33A8MZF0 331 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 CEACAM5P06731 702 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 ARID5AQ03989 594 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 MFSD4AQ8N468 514 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 DNAJB8Q8NHS0 232 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 ZNF512BQ96KM6 892 aaPredicted RBP6.9□□□□□ -1.3
CNIH4-201ENST00000366856 CEP131Q9UPN4 1083 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 MAPK8IP1Q9UQF2 711 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 CNTNAP4Q9C0A0 1308 aa6.9□□□□□ -1.3
CNIH4-201ENST00000366856 SHROOM4Q9ULL8 1493 aa6.9□□□□□ -1.31
CNIH4-201ENST00000366856 MED26O95402 600 aa6.89□□□□□ -1.31
CNIH4-201ENST00000366856 NME1P15531 152 aaKnown RBP6.89□□□□□ -1.31
CNIH4-201ENST00000366856 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
CNIH4-201ENST00000366856 OXCT1P55809 520 aa6.89□□□□□ -1.31
CNIH4-201ENST00000366856 INTS5Q6P9B9 1019 aaKnown RBP6.89□□□□□ -1.31
CNIH4-201ENST00000366856 LSRQ86X29 649 aaPredicted RBP6.89□□□□□ -1.31
CNIH4-201ENST00000366856 NETO1Q8TDF5 533 aa6.89□□□□□ -1.31
CNIH4-201ENST00000366856 SEC16BQ96JE7 1060 aa6.89□□□□□ -1.31
CNIH4-201ENST00000366856 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
CNIH4-201ENST00000366856 ANGEL1Q9UNK9 670 aaKnown RBP6.89□□□□□ -1.31
CNIH4-201ENST00000366856 RGS13O14921 159 aa6.88□□□□□ -1.31
CNIH4-201ENST00000366856 PPP1R13LQ8WUF5 828 aa6.88□□□□□ -1.31
CNIH4-201ENST00000366856 KREMEN1Q96MU8 473 aa6.88□□□□□ -1.31
CNIH4-201ENST00000366856 SLC9A7Q96T83 725 aa6.88□□□□□ -1.31
CNIH4-201ENST00000366856 MKRN2Q9H000 416 aaKnown RBP6.88□□□□□ -1.31
CNIH4-201ENST00000366856 PPP1R1BQ9UD71 204 aaPredicted RBP6.88□□□□□ -1.31
CNIH4-201ENST00000366856 MEIS3P2A8K0S8 358 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 LRRN2O75325 713 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 CLEC3AO75596 197 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 UBOX5O94941 541 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 CD97P48960 835 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 IFI16Q16666 785 aaKnown RBP6.87□□□□□ -1.31
CNIH4-201ENST00000366856 CDCP2Q5VXM1 449 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 TDRD10Q5VZ19 366 aaKnown RBP6.87□□□□□ -1.31
CNIH4-201ENST00000366856 SLC6A18Q96N87 628 aa6.87□□□□□ -1.31
CNIH4-201ENST00000366856 H3BS24 57 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 IGF2BP3O00425 579 aaKnown RBP eCLIP6.86□□□□□ -1.31
CNIH4-201ENST00000366856 GUCY2CP25092 1073 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 CD96P40200 585 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 LRP8Q14114 963 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 ZYXQ15942 572 aaKnown RBP6.86□□□□□ -1.31
CNIH4-201ENST00000366856 FAM214BQ7L5A3 538 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 FLCNQ8NFG4 579 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 TM9SF2Q99805 663 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 BSDC1Q9NW68 430 aaPredicted RBP6.86□□□□□ -1.31
CNIH4-201ENST00000366856 STRIP2Q9ULQ0 834 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 PLAGL2Q9UPG8 496 aa6.86□□□□□ -1.31
CNIH4-201ENST00000366856 ACRP10323 421 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 TNK2Q07912 1038 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 BNIP3Q12983 259 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 AOC3Q16853 763 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 MSMPQ1L6U9 139 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 SPACA3Q8IXA5 215 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 SHDQ96IW2 340 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 HRASLS5Q96KN8 279 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 HSPA12BQ96MM6 686 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 TANGO6Q9C0B7 1094 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.85□□□□□ -1.31
CNIH4-201ENST00000366856 KCNH3Q9ULD8 1083 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 CAPN6Q9Y6Q1 641 aa6.85□□□□□ -1.31
CNIH4-201ENST00000366856 TMEM265A0A087WTH1 108 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 HYAL3O43820 417 aaPredicted RBP6.84□□□□□ -1.31
CNIH4-201ENST00000366856 TP53P04637 393 aaPredicted RBP6.84□□□□□ -1.31
CNIH4-201ENST00000366856 KIR3DL1P43629 444 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 GIPRP48546 466 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 RNF4P78317 190 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 NKPD1Q17RQ9 610 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 UNC5AQ6ZN44 842 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 ZNF574Q6ZN55 896 aaPredicted RBP6.84□□□□□ -1.31
CNIH4-201ENST00000366856 TTC6Q86TZ1 520 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 TMEM192Q8IY95 271 aa6.84□□□□□ -1.31
CNIH4-201ENST00000366856 CCDC144CPQ8IYA2 1237 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms