RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 IFIH1Q9BYX4 1025 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 PARP3Q9Y6F1 533 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF532Q9HCE3 1301 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 EEF2P13639 858 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ARID5AQ03989 594 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 RHOXF2BP0C7M4 288 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF174Q15697 407 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 CCDC114Q96M63 670 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 RHOXF2Q9BQY4 288 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 RTEL1Q9NZ71 1219 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 hCG_1984214I3L0E3 225 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF713Q8N859 430 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 TMEM63CQ9P1W3 806 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 BZW2Q9Y6E2 419 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 GAS8O95995 478 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 OR8K1Q8NGG5 319 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 CAMSAP1Q5T5Y3 1602 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 RSRC1Q96IZ7 334 aaKnown RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 APBA1Q02410 837 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 FRMPD1Q5SYB0 1578 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 ERCC6LQ2NKX8 1250 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 HAUS2Q9NVX0 235 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 PICALMQ13492 652 aa13.38□□□□□ -0.27
CDC42BPA-203ENST00000366766 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 MAP4K1Q92918 833 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 SAR1BQ9Y6B6 198 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 PIK3AP1Q6ZUJ8 805 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 CUL4AQ13619 759 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 VTI1AQ96AJ9 217 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 FAM184BQ9ULE4 1060 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 MTMR6Q9Y217 621 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ABCA6Q8N139 1617 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 IKBKBO14920 756 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ABCD1P33897 745 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 FYB2Q5VWT5 728 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 SLFN12Q8IYM2 578 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 IFT81Q8WYA0 676 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 AK8Q96MA6 479 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 MAK16Q9BXY0 300 aaKnown RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 FOXP1Q9H334 677 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 DCAF17Q5H9S7 520 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZMYND15Q9H091 742 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 HAUS4Q9H6D7 363 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZHX1Q9UKY1 873 aaPredicted RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 LRWD1Q9UFC0 647 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 GSDMAQ96QA5 445 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 PDE6BP35913 854 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF654Q8IZM8 581 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 ARHGAP24Q8N264 748 aa13.37□□□□□ -0.27
CDC42BPA-203ENST00000366766 LONP1P36776 959 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 SLC1A4P43007 532 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 NBPF14Q5TI25 921 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 PLCB3Q01970 1234 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 GBP6Q6ZN66 633 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 KIF20BQ96Q89 1820 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 RUNDC3BQ96NL0 473 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 NCOA5Q9HCD5 579 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 SPOPO43791 374 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 GTF2A1P52655 376 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 FNBP1Q96RU3 617 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 ATP8A2Q9NTI2 1148 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 STK10O94804 968 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 COMMD10Q9Y6G5 202 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZNF853P0CG23 659 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 TDRD7Q8NHU6 1098 aaKnown RBP13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 PPFIA4O75335 1185 aa13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZSCAN10Q96SZ4 725 aaPredicted RBP13.36□□□□□ -0.27
CDC42BPA-203ENST00000366766 ZEB2O60315 1214 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 TEKT1Q969V4 418 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 NDUFAB1O14561 156 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 GNPATO15228 680 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 RNF26Q9BY78 433 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 ARHGEF35A5YM69 484 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 GTPBP6O43824 516 aaPredicted RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 PPP6R2O75170 966 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 EEF1GP26641 437 aaKnown RBP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 TMC4Q7Z404 712 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■■■■■ 39.6
CDC42BPA-203ENST00000366766 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 RASSF2P50749 326 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 ARMT1Q9H993 441 aa13.35□□□□□ -0.27
CDC42BPA-203ENST00000366766 ADGRB3O60242 1522 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms