RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 RAB3GAP1Q15042 981 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 NBPF12Q5TAG4 269 aaPredicted RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 TATDN1Q6P1N9 297 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 NEDD1Q8NHV4 660 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 ZNF274Q96GC6 653 aaPredicted RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 SWAP70Q9UH65 585 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 ERICH2A1L162 156 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 JAK2O60674 1132 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 CDC27P30260 824 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 EPHX2P34913 555 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 PKP1Q13835 747 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 SART3Q15020 963 aaKnown RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 IFIT1BQ5T764 474 aaKnown RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 TNPO1Q92973 898 aaKnown RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 ZNF287Q9HBT7 754 aa14.3□□□□□ -0.12
CAPN9-203ENST00000366666 FAM217BQ9NTX9 383 aaPredicted RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 BAZ2BQ9UIF8 2168 aaKnown RBP14.3□□□□□ -0.12
CAPN9-203ENST00000366666 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
CAPN9-203ENST00000366666 ATAD5Q96QE3 1844 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 CCDC69A6NI79 296 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 MPHOSPH10O00566 681 aaKnown RBP14.29□□□□□ -0.12
CAPN9-203ENST00000366666 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 ADD1P35611 737 aaKnown RBP14.29□□□□□ -0.12
CAPN9-203ENST00000366666 CERKLQ49MI3 558 aaPredicted RBP14.29□□□□□ -0.12
CAPN9-203ENST00000366666 ZNF654Q8IZM8 581 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 PANK2Q9BZ23 570 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 GUCY1A2P33402 732 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 TNNI2P48788 182 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 TNFAIP1Q13829 316 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
CAPN9-203ENST00000366666 MTA3Q9BTC8 594 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 SLC12A7Q9Y666 1083 aa14.29□□□□□ -0.12
CAPN9-203ENST00000366666 IGKV6D-41A0A0C4DH26 115 aa14.28□□□□□ -0.12
CAPN9-203ENST00000366666 NUP133Q8WUM0 1156 aa14.28□□□□□ -0.12
CAPN9-203ENST00000366666 INTS4Q96HW7 963 aaKnown RBP14.28□□□□□ -0.12
CAPN9-203ENST00000366666 TAF1DQ9H5J8 278 aaPredicted RBP14.28□□□□□ -0.12
CAPN9-203ENST00000366666 MTMR7Q9Y216 660 aa14.28□□□□□ -0.12
CAPN9-203ENST00000366666 SSC5DA1L4H1 1573 aa14.28□□□□□ -0.12
CAPN9-203ENST00000366666 PLIN4Q96Q06 1357 aa14.27□□□□□ -0.12
CAPN9-203ENST00000366666 ADM5C9JUS6 153 aa14.27□□□□□ -0.12
CAPN9-203ENST00000366666 ZBTB43O43298 467 aa14.27□□□□□ -0.12
CAPN9-203ENST00000366666 TROAPQ12815 778 aa14.27□□□□□ -0.12
CAPN9-203ENST00000366666 TMEM47Q9BQJ4 181 aa14.27□□□□□ -0.12
CAPN9-203ENST00000366666 MTMR4Q9NYA4 1195 aa14.27□□□□□ -0.12
CAPN9-203ENST00000366666 HERC5Q9UII4 1024 aaKnown RBP14.27□□□□□ -0.12
CAPN9-203ENST00000366666 UBE2Q2LH0YL09 131 aa14.27□□□□□ -0.13
CAPN9-203ENST00000366666 GH2P01242 217 aa14.27□□□□□ -0.13
CAPN9-203ENST00000366666 METAP2P50579 478 aaKnown RBP eCLIP14.27□□□□□ -0.13
CAPN9-203ENST00000366666 MAP3K10Q02779 954 aa14.27□□□□□ -0.13
CAPN9-203ENST00000366666 SEPT2Q15019 361 aa14.27□□□□□ -0.13
CAPN9-203ENST00000366666 EAPPQ56P03 285 aaPredicted RBP14.27□□□□□ -0.13
CAPN9-203ENST00000366666 CCDC84Q86UT8 332 aaPredicted RBP14.27□□□□□ -0.13
CAPN9-203ENST00000366666 SIAH1Q8IUQ4 282 aa14.27□□□□□ -0.13
CAPN9-203ENST00000366666 APOBEC3FQ8IUX4 373 aaKnown RBP14.27□□□□□ -0.13
CAPN9-203ENST00000366666 NSUN7Q8NE18 718 aaKnown RBP14.27□□□□□ -0.13
CAPN9-203ENST00000366666 DDX11Q96FC9 970 aa14.27□□□□□ -0.13
CAPN9-203ENST00000366666 GJB2P29033 226 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 NOVP48745 357 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 CLEC17AQ6ZS10 378 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
CAPN9-203ENST00000366666 ANKS1AQ92625 1134 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 TMTC2Q8N394 836 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 CCDC82Q8N4S0 544 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 PNMA1Q8ND90 353 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 NAP1L5Q96NT1 182 aaPredicted RBP14.26□□□□□ -0.13
CAPN9-203ENST00000366666 CLIP2Q9UDT6 1046 aa14.26□□□□□ -0.13
CAPN9-203ENST00000366666 TBC1D12O60347 775 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 NTRK3Q16288 839 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 USP50Q70EL3 339 aaPredicted RBP14.25□□□□□ -0.13
CAPN9-203ENST00000366666 FANCBQ8NB91 859 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 ZNF526Q8TF50 670 aaPredicted RBP14.25□□□□□ -0.13
CAPN9-203ENST00000366666 CCDC17Q96LX7 622 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 KAT14Q9H8E8 782 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.25□□□□□ -0.13
CAPN9-203ENST00000366666 MYH6P13533 1939 aa14.25□□□□□ -0.13
CAPN9-203ENST00000366666 PTPDC1A2A3K4 754 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 FDPSP14324 419 aaKnown RBP14.24□□□□□ -0.13
CAPN9-203ENST00000366666 ATP2B2Q01814 1243 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 PRKG1Q13976 671 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 PHKBQ93100 1093 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 DCPSQ96C86 337 aaKnown RBP14.24□□□□□ -0.13
CAPN9-203ENST00000366666 RRAGCQ9HB90 399 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 PLEKHA8P1O95397 391 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 EEF2P13639 858 aaKnown RBP14.24□□□□□ -0.13
CAPN9-203ENST00000366666 INPP5BP32019 993 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 KRT26Q7Z3Y9 468 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 STAG2Q8N3U4 1231 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms