RNA–Protein interactions for RNA: ENST00000362076.8

C1orf43-202, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-202ENST00000362076 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
C1orf43-202ENST00000362076 FAM173BQ6P4H8 233 aa18.53■□□□□ 0.56
C1orf43-202ENST00000362076 LEO1Q8WVC0 666 aaPredicted RBP18.53■□□□□ 0.56
C1orf43-202ENST00000362076 LZTS2Q9BRK4 669 aa18.53■□□□□ 0.56
C1orf43-202ENST00000362076 TFIP11Q9UBB9 837 aaKnown RBP18.53■□□□□ 0.56
C1orf43-202ENST00000362076 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
C1orf43-202ENST00000362076 FER1L6Q2WGJ9 1857 aa18.53■□□□□ 0.56
C1orf43-202ENST00000362076 MYH8P13535 1937 aa18.53■□□□□ 0.56
C1orf43-202ENST00000362076 NOVP48745 357 aa18.52■□□□□ 0.56
C1orf43-202ENST00000362076 FUT2Q10981 343 aa18.52■□□□□ 0.56
C1orf43-202ENST00000362076 L1TD1Q5T7N2 865 aaKnown RBP18.52■□□□□ 0.56
C1orf43-202ENST00000362076 JDP2Q8WYK2 163 aa18.52■□□□□ 0.56
C1orf43-202ENST00000362076 CCDC17Q96LX7 622 aa18.52■□□□□ 0.56
C1orf43-202ENST00000362076 GMLQ99445 158 aa18.52■□□□□ 0.56
C1orf43-202ENST00000362076 PI4KBQ9UBF8 816 aa18.52■□□□□ 0.56
C1orf43-202ENST00000362076 GOLGA6L3A6NEY3 463 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 PSMD14O00487 310 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 TOP1P11387 765 aaKnown RBP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 ZNF445P59923 1031 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 GNL2Q13823 731 aaKnown RBP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 OTUD7BQ6GQQ9 843 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 FOXP4Q8IVH2 680 aaPredicted RBP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 TMOD2Q9NZR1 351 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 PPP1R1BQ9UD71 204 aaPredicted RBP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 STX8Q9UNK0 236 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 ADAMTSL1Q8N6G6 1762 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 COL2A1P02458 1487 aaPredicted RBP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 LTBP3Q9NS15 1303 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 RAD17O75943 681 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 LETM1O95202 739 aaPredicted RBP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 U2AF2P26368 475 aaKnown RBP eCLIP18.51■□□□□ 0.55
C1orf43-202ENST00000362076 NFIAQ12857 509 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 GRM4Q14833 912 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 ZSCAN23Q3MJ62 389 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 AIFM3Q96NN9 605 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 TMEM47Q9BQJ4 181 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 RTEL1Q9NZ71 1219 aa18.51■□□□□ 0.55
C1orf43-202ENST00000362076 TNIP1Q15025 636 aa18.5■□□□□ 0.55
C1orf43-202ENST00000362076 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
C1orf43-202ENST00000362076 MTMR14Q8NCE2 650 aa18.5■□□□□ 0.55
C1orf43-202ENST00000362076 FOXP1Q9H334 677 aaPredicted RBP18.5■□□□□ 0.55
C1orf43-202ENST00000362076 POLR3EQ9NVU0 708 aa18.5■□□□□ 0.55
C1orf43-202ENST00000362076 FSD2A1L4K1 749 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 YEATS4O95619 227 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 MMP1P03956 469 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 PTGER2P43116 358 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 DLGAP5Q15398 846 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 FAM177A1Q8N128 213 aaPredicted RBP18.49■□□□□ 0.55
C1orf43-202ENST00000362076 CCDC82Q8N4S0 544 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 TMEM63CQ9P1W3 806 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 FAM198AQ9UFP1 575 aa18.49■□□□□ 0.55
C1orf43-202ENST00000362076 V9GY48 417 aaPredicted RBP18.49■□□□□ 0.55
C1orf43-202ENST00000362076 SPDYE2BA6NHP3 402 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 PLEKHA8P1O95397 391 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 SPDYE6P0CI01 402 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 SMARCA1P28370 1054 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 GUCY1A2P33402 732 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 CIAPIN1Q6FI81 312 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 SRBD1Q8N5C6 995 aaKnown RBP18.48■□□□□ 0.55
C1orf43-202ENST00000362076 USP28Q96RU2 1077 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 TRIM34Q9BYJ4 488 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 MTMR4Q9NYA4 1195 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 ATRNL1Q5VV63 1379 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 CNTNAP5Q8WYK1 1306 aa18.48■□□□□ 0.55
C1orf43-202ENST00000362076 IGKV6D-41A0A0C4DH26 115 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 SHMT1P34896 483 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 PKN1Q16512 942 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 FKBP1CQ5VVH2 108 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 CMTR1Q8N1G2 835 aaKnown RBP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 KCNG4Q8TDN1 519 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 CEP95Q96GE4 821 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 PRMT6Q96LA8 375 aaPredicted RBP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 TDRD3Q9H7E2 651 aaKnown RBP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 GJB4Q9NTQ9 266 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 TTLL1O95922 423 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 NASPP49321 788 aaPredicted RBP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 CXCL9Q07325 125 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 ZSCAN29Q8IWY8 852 aaPredicted RBP18.47■□□□□ 0.55
C1orf43-202ENST00000362076 BRMS1Q9HCU9 246 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 PCDHAC2Q9Y5I4 1007 aa18.47■□□□□ 0.55
C1orf43-202ENST00000362076 COL4A5P29400 1685 aa18.46■□□□□ 0.55
C1orf43-202ENST00000362076 PALM3A6NDB9 673 aaPredicted RBP18.46■□□□□ 0.55
C1orf43-202ENST00000362076 KIF28PB7ZC32 967 aa18.46■□□□□ 0.55
C1orf43-202ENST00000362076 PARP1P09874 1014 aaKnown RBP18.46■□□□□ 0.55
C1orf43-202ENST00000362076 RPS12P25398 132 aaKnown RBP18.46■□□□□ 0.55
C1orf43-202ENST00000362076 TCP10Q12799 353 aa18.46■□□□□ 0.55
C1orf43-202ENST00000362076 PFKFB3Q16875 520 aaPredicted RBP18.46■□□□□ 0.55
C1orf43-202ENST00000362076 NOSTRINQ8IVI9 506 aa18.46■□□□□ 0.55
C1orf43-202ENST00000362076 SH3GLB2Q9NR46 395 aa18.46■□□□□ 0.55
C1orf43-202ENST00000362076 MAD2L2Q9UI95 211 aa18.46■□□□□ 0.55
C1orf43-202ENST00000362076 PSDA5PKW4 1024 aaPredicted RBP18.45■□□□□ 0.54
C1orf43-202ENST00000362076 NFKBIEO00221 500 aa18.45■□□□□ 0.54
C1orf43-202ENST00000362076 MYO1BO43795 1136 aa18.45■□□□□ 0.54
C1orf43-202ENST00000362076 SCG2P13521 617 aa18.45■□□□□ 0.54
C1orf43-202ENST00000362076 AKR1B1P15121 316 aa18.45■□□□□ 0.54
C1orf43-202ENST00000362076 MRE11P49959 708 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms