RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 FMNL1O95466 1100 aaPredicted RBP13.34□□□□□ -0.27
HPS1-204ENST00000361490 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
HPS1-204ENST00000361490 LETM2Q2VYF4 491 aa13.34□□□□□ -0.27
HPS1-204ENST00000361490 CRY2Q49AN0 593 aa13.34□□□□□ -0.27
HPS1-204ENST00000361490 CCDC34Q96HJ3 373 aa13.34□□□□□ -0.27
HPS1-204ENST00000361490 FEZ1Q99689 392 aa13.34□□□□□ -0.27
HPS1-204ENST00000361490 TMEM47Q9BQJ4 181 aa13.34□□□□□ -0.27
HPS1-204ENST00000361490 FSD2A1L4K1 749 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 SGMS1Q86VZ5 419 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 NIM1KQ8IY84 436 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
HPS1-204ENST00000361490 PCDHB6Q9Y5E3 794 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 TNNI2P48788 182 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 RBM28Q9NW13 759 aaKnown RBP13.33□□□□□ -0.28
HPS1-204ENST00000361490 HDAC9Q9UKV0 1011 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
HPS1-204ENST00000361490 ZNF202O95125 648 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 VEGFAP15692 232 aaPredicted RBP13.33□□□□□ -0.28
HPS1-204ENST00000361490 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 SRBD1Q8N5C6 995 aaKnown RBP13.33□□□□□ -0.28
HPS1-204ENST00000361490 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 AKT1S1Q96B36 256 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 CSRNP1Q96S65 589 aa13.33□□□□□ -0.28
HPS1-204ENST00000361490 AKR1B1P15121 316 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 PODNQ7Z5L7 613 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 RTFDC1Q9BY42 306 aaPredicted RBP13.32□□□□□ -0.28
HPS1-204ENST00000361490 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
HPS1-204ENST00000361490 TPM4P67936 248 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 CFAP100Q494V2 611 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 USH1GQ495M9 461 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 TMC4Q7Z404 712 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 NBPF11Q86T75 865 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 RRP36Q96EU6 259 aaKnown RBP13.32□□□□□ -0.28
HPS1-204ENST00000361490 AGXT2Q9BYV1 514 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 GOLPH3LQ9H4A5 285 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 BIN2Q9UBW5 565 aaPredicted RBP13.32□□□□□ -0.28
HPS1-204ENST00000361490 ESPNB1AK53 854 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 SCG2P13521 617 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 HOXA10P31260 410 aaPredicted RBP13.32□□□□□ -0.28
HPS1-204ENST00000361490 CDC42EP5Q6NZY7 148 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 COA7Q96BR5 231 aa13.32□□□□□ -0.28
HPS1-204ENST00000361490 SHANK3Q9BYB0 1731 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 USP17L5A8MUK1 530 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 PFKFB1P16118 471 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 SLC1A4P43007 532 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 CERKLQ49MI3 558 aaPredicted RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 ZFPM1Q8IX07 1006 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 COL1A1P02452 1464 aaPredicted RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 MYO1BO43795 1136 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 MMP1P03956 469 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 INF2Q27J81 1249 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 TTC12Q9H892 705 aaPredicted RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 HOOK1Q9UJC3 728 aaKnown RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 RCOR1Q9UKL0 485 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 GNAQP50148 359 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 CCDC93Q567U6 631 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 CCDC84Q86UT8 332 aaPredicted RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 GRAMD1CQ8IYS0 662 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 PIGSQ96S52 555 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 NAT10Q9H0A0 1025 aaKnown RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 CLSTN2Q9H4D0 955 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 ZHX3Q9H4I2 956 aa13.31□□□□□ -0.28
HPS1-204ENST00000361490 DDX4Q9NQI0 724 aaKnown RBP13.31□□□□□ -0.28
HPS1-204ENST00000361490 RASA1P20936 1047 aa13.3□□□□□ -0.28
HPS1-204ENST00000361490 LMOD1P29536 600 aaPredicted RBP13.3□□□□□ -0.28
HPS1-204ENST00000361490 PNOCQ13519 176 aa13.3□□□□□ -0.28
HPS1-204ENST00000361490 RILPL1Q5EBL4 403 aa13.3□□□□□ -0.28
HPS1-204ENST00000361490 IL17RAQ96F46 866 aa13.3□□□□□ -0.28
HPS1-204ENST00000361490 NUP88Q99567 741 aaPredicted RBP13.3□□□□□ -0.28
HPS1-204ENST00000361490 RGS17Q9UGC6 210 aaPredicted RBP13.3□□□□□ -0.28
HPS1-204ENST00000361490 KCNH3Q9ULD8 1083 aa13.3□□□□□ -0.28
HPS1-204ENST00000361490 COL22A1Q8NFW1 1626 aaPredicted RBP13.29□□□□□ -0.28
HPS1-204ENST00000361490 GPR75-ASB3A0A0A6YYF3 556 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 SERPINC1P01008 464 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 TROAPQ12815 778 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 ADALQ6DHV7 355 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 TMTC3Q6ZXV5 915 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 ANO10Q9NW15 660 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 TXLNAP40222 546 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 TTC38Q5R3I4 469 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 FAM200AQ8TCP9 573 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 RNF26Q9BY78 433 aaPredicted RBP13.29□□□□□ -0.28
HPS1-204ENST00000361490 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 MAPK8IP1Q9UQF2 711 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 SMCO2A6NFE2 343 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 STX17P56962 302 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 NTRK3Q16288 839 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 PTPN21Q16825 1174 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 PIM2Q9P1W9 311 aa13.29□□□□□ -0.28
HPS1-204ENST00000361490 GOLGA6L6A8MZA4 724 aa13.28□□□□□ -0.28
HPS1-204ENST00000361490 IL1R1P14778 569 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms