RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 KCNJ6P48051 423 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 GNG11P61952 73 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 KARSQ15046 597 aaKnown RBP10.36□□□□□ -0.75
TOP1-201ENST00000361337 NKX1-1Q15270 411 aaPredicted RBP10.36□□□□□ -0.75
TOP1-201ENST00000361337 PHKBQ93100 1093 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 SCNN1DP51172 638 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 GTF2IP78347 998 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
TOP1-201ENST00000361337 UBXN6Q9BZV1 441 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 PLEKHA4Q9H4M7 779 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 MKNK2Q9HBH9 465 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 LCMT1Q9UIC8 334 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 RFX7Q2KHR2 1363 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 UBN2Q6ZU65 1347 aa10.36□□□□□ -0.75
TOP1-201ENST00000361337 ITGB4P16144 1822 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 TRIM66O15016 1216 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
TOP1-201ENST00000361337 MYL5Q02045 173 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 FAM212AQ96EL1 285 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 MYL10Q9BUA6 226 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 ISCA1Q9BUE6 129 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 PUS7LQ9H0K6 701 aaKnown RBP10.35□□□□□ -0.75
TOP1-201ENST00000361337 VAT1LQ9HCJ6 419 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 TUBE1Q9UJT0 475 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 STX8Q9UNK0 236 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 ZNF532Q9HCE3 1301 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 H3BQF6 201 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 IKBKBO14920 756 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 CHRNA5P30532 468 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 GRIN1Q05586 938 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 MB21D2Q8IYB1 491 aaPredicted RBP10.35□□□□□ -0.75
TOP1-201ENST00000361337 PARD6BQ9BYG5 372 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 INCENPQ9NQS7 918 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 PCDHA5Q9Y5H7 936 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 EFCAB8A8MWE9 144 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 IFIT3O14879 490 aaKnown RBP10.35□□□□□ -0.75
TOP1-201ENST00000361337 GPAA1O43292 621 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 FMR1Q06787 632 aaKnown RBP eCLIP10.35□□□□□ -0.752e-6■■■■□ 22.2
TOP1-201ENST00000361337 TCP10Q12799 353 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 SMC1AQ14683 1233 aaKnown RBP10.35□□□□□ -0.75
TOP1-201ENST00000361337 SLC39A14Q15043 492 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
TOP1-201ENST00000361337 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 GRAMD1CQ8IYS0 662 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 LPIN2Q92539 896 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 DHX58Q96C10 678 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 UBAC1Q9BSL1 405 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 DBNDD1Q9H9R9 158 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 LRRC4BQ9NT99 713 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 VPS18Q9P253 973 aa10.35□□□□□ -0.75
TOP1-201ENST00000361337 CAMTA2O94983 1202 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 KIFC2Q96AC6 838 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 MRPL44Q9H9J2 332 aaKnown RBP10.34□□□□□ -0.75
TOP1-201ENST00000361337 SCAF8Q9UPN6 1271 aaKnown RBP10.34□□□□□ -0.75
TOP1-201ENST00000361337 HPSEQ9Y251 543 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 EIF6P56537 245 aaKnown RBP10.34□□□□□ -0.75
TOP1-201ENST00000361337 PPP2R3AQ06190 1150 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 PTPAQ15257 358 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 ZSCAN26Q16670 478 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 BARGINQ6ZT62 677 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 KIAA0825Q8IV33 1275 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 SPATA5Q8NB90 893 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 MED15Q96RN5 788 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 NARFQ9UHQ1 456 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 PRKAB2O43741 272 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 MAP3K9P80192 1104 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 CTDSPL2Q05D32 466 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 DPP8Q6V1X1 898 aaPredicted RBP10.34□□□□□ -0.75
TOP1-201ENST00000361337 SLC51AQ86UW1 340 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 TC2NQ8N9U0 490 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 SUGCTQ9HAC7 445 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 MCM9Q9NXL9 1143 aa10.34□□□□□ -0.75
TOP1-201ENST00000361337 FEZ2Q9UHY8 353 aaPredicted RBP10.34□□□□□ -0.75
TOP1-201ENST00000361337 hCG_1642624A0A1W2PR95 340 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 UQCRFS1P1P0C7P4 283 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 C2CD5Q86YS7 1000 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 BAG1Q99933 345 aaPredicted RBP10.33□□□□□ -0.76
TOP1-201ENST00000361337 FUT8Q9BYC5 575 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 FAM107BQ9H098 131 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 MRFAP1Q9Y605 127 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 LRP5O75197 1615 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 B4E1Z4 1266 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 CASQ1P31415 396 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 DIXDC1Q155Q3 683 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 WWC2Q6AWC2 1192 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 BRAPQ7Z569 592 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 TXLNBQ8N3L3 684 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 MAP3K14Q99558 947 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 ALG1Q9BT22 464 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 VEZTQ9HBM0 779 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 H0YIN7 160 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 KRT40Q6A162 431 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 CYB5R4Q7L1T6 521 aa10.33□□□□□ -0.76
TOP1-201ENST00000361337 RSRC2Q7L4I2 434 aaKnown RBP10.33□□□□□ -0.76
TOP1-201ENST00000361337 FNBP4Q8N3X1 1017 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms