RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 SLU7O95391 586 aaKnown RBP11.16□□□□□ -0.62
SIN3A-201ENST00000360439 SCNN1DP51172 638 aa11.16□□□□□ -0.62
SIN3A-201ENST00000360439 NFIXQ14938 502 aa11.16□□□□□ -0.62
SIN3A-201ENST00000360439 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
SIN3A-201ENST00000360439 KAT14Q9H8E8 782 aa11.16□□□□□ -0.62
SIN3A-201ENST00000360439 ARFGAP3Q9NP61 516 aa11.16□□□□□ -0.62
SIN3A-201ENST00000360439 WHAMMP3Q1A5X7 153 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 LINC00116Q8NCU8 138 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 ZNF804BA4D1E1 1349 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 MAP2P11137 1827 aaKnown RBP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 RFX7Q2KHR2 1363 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 CATIPQ7Z7H3 387 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 CCDC65Q8IXS2 484 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 TBC1D22AQ8WUA7 517 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 BEGAINQ9BUH8 593 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 ST7Q9NRC1 585 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 CAPN7Q9Y6W3 813 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 RNF113AO15541 343 aaKnown RBP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 BCAMP50895 628 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 ME3Q16798 604 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 LUZP1Q86V48 1076 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 EIF3CLB5ME19 914 aaKnown RBP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 XDHP47989 1333 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 CCDC144CPQ8IYA2 1237 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 NCOA7Q8NI08 942 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 SPDL1Q96EA4 605 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 ERO1AQ96HE7 468 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 EIF3CQ99613 913 aaKnown RBP11.15□□□□□ -0.62
SIN3A-201ENST00000360439 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.62
SIN3A-201ENST00000360439 MBD4O95243 580 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 ZNF280DQ6N043 979 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TTC6Q86TZ1 520 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 PPFIBP1Q86W92 1011 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 MAP4K1Q92918 833 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 SPATA17Q96L03 361 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 PUS3Q9BZE2 481 aaKnown RBP11.14□□□□□ -0.63
SIN3A-201ENST00000360439 A0A0G2JLW4 131 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 EXOC8Q8IYI6 725 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TDRD7Q8NHU6 1098 aaKnown RBP11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TAOK3Q9H2K8 898 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 SMIM24O75264 130 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TOP1P11387 765 aaKnown RBP11.14□□□□□ -0.63
SIN3A-201ENST00000360439 MTX1Q13505 466 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 ITPK1Q13572 414 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TNIP1Q15025 636 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TTC14Q96N46 770 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 PICK1Q9NRD5 415 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 UBR1Q8IWV7 1749 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 GOLGA8BA8MQT2 603 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 ATP5JP18859 108 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 CHRNA5P30532 468 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 TUBB4BP68371 445 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 SYNE4Q8N205 404 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 SPTLC3Q9NUV7 552 aa11.14□□□□□ -0.63
SIN3A-201ENST00000360439 CFAP100Q494V2 611 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 CEP85LQ5SZL2 805 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 CEP128Q6ZU80 1094 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 TMC6Q7Z403 805 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 TRAIPQ9BWF2 469 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 PTPDC1A2A3K4 754 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 ELF1P32519 619 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 PLS1Q14651 629 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 SLMAPQ14BN4 828 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 E2F5Q15329 346 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 SULF1Q8IWU6 871 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 CDK5RAP3Q96JB5 506 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 TMC4Q7Z404 712 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 RTKN2Q8IZC4 609 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 ESR2Q92731 530 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 TEKT1Q969V4 418 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 GRAPQ13588 217 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 SMC1AQ14683 1233 aaKnown RBP11.13□□□□□ -0.63
SIN3A-201ENST00000360439 GRAPLQ8TC17 118 aaPredicted RBP11.13□□□□□ -0.63
SIN3A-201ENST00000360439 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
SIN3A-201ENST00000360439 BICD1Q96G01 975 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 DSCC1Q9BVC3 393 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 PLEKHA4Q9H4M7 779 aa11.13□□□□□ -0.63
SIN3A-201ENST00000360439 ZAP70P43403 619 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 WDR75Q8IWA0 830 aaKnown RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 CARMIL3Q8ND23 1372 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 RPAP1Q9BWH6 1393 aaPredicted RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 GNAT2P19087 354 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 EIF5P55010 431 aaKnown RBP11.12□□□□□ -0.63
SIN3A-201ENST00000360439 POTEAQ6S8J7 498 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 CCDC121Q6ZUS5 278 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 SRLQ86TD4 932 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 MORC4Q8TE76 937 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 ZSWIM4Q9H7M6 989 aa11.12□□□□□ -0.63
SIN3A-201ENST00000360439 KIF9Q9HAQ2 790 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms