RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 IRX3P78415 501 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 NR5A1Q13285 461 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 CUL4BQ13620 913 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 RTN1Q16799 776 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 ICE2Q659A1 982 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 VIPAS39Q9H9C1 493 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 DEXIO95424 95 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 FECHP22830 423 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 ERVK-24P63145 666 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 ANKRD20A12PQ8NF67 263 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 ABHD10Q9NUJ1 306 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 MYO5AQ9Y4I1 1855 aaKnown RBP11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 ATRNO75882 1429 aa11.24□□□□□ -0.61
TRAPPC2-201ENST00000359680 KIF13AQ9H1H9 1805 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 ABL1P00519 1130 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 CORO7P57737 925 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 IFIT5Q13325 482 aaKnown RBP11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 TRIM14Q14142 442 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 SART3Q15020 963 aaKnown RBP11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 UBE3CQ15386 1083 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 KRT28Q7Z3Y7 464 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 SMYD4Q8IYR2 804 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 GSDMAQ96QA5 445 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 SLF1Q9BQI6 1058 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 CABP5Q9NP86 173 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 STRN4Q9NRL3 753 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 ZSWIM5Q9P217 1185 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 CTNND2Q9UQB3 1225 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 ZNF532Q9HCE3 1301 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 A1BGP04217 495 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 ARHGAP25P42331 645 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 NAPBQ9H115 298 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 CNNM2Q9H8M5 875 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 INCENPQ9NQS7 918 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 TOMM22Q9NS69 142 aa11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 AATFQ9NY61 560 aaKnown RBP eCLIP11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
TRAPPC2-201ENST00000359680 CCDC196A0A1B0GTZ2 297 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 TRIM75PA6NK02 468 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 CASP1P29466 404 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 AMPD2Q01433 879 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 PACS2Q86VP3 889 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 CERS3Q8IU89 383 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 EPSTI1Q96J88 318 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 KRT23Q9C075 422 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 GUCA1BQ9UMX6 200 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 CHD4Q14839 1912 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 ERICH2A1L162 156 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 KRT9P35527 623 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 AARSP49588 968 aaKnown RBP eCLIP11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 CTDSPL2Q05D32 466 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 WTAPQ15007 396 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 KRT31Q15323 416 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 DNAJC21Q5F1R6 531 aaKnown RBP11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 RRP12Q5JTH9 1297 aaKnown RBP11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 VPS16Q9H269 839 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 PLEKHA4Q9H4M7 779 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 PIH1D3Q9NQM4 214 aaKnown RBP11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 JRKLQ9Y4A0 524 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 AKAP11Q9UKA4 1901 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 A0A087X0B3 334 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 FER1L4A9Z1Z3 1794 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 PPP1R3GB7ZBB8 358 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 PDE6AP16499 860 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 USP14P54578 494 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 MST1RQ04912 1400 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 SPAG1Q07617 926 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 ANKLE2Q86XL3 938 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 OXER1Q8TDS5 423 aa11.22□□□□□ -0.61
TRAPPC2-201ENST00000359680 GLI3P10071 1580 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 XBP1P17861 261 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 DPYDQ12882 1025 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 ALX1Q15699 326 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 EFCAB13Q8IY85 973 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 STRBPQ96SI9 672 aaKnown RBP11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 CRACR2AQ9BSW2 395 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 LIMA1Q9UHB6 759 aaKnown RBP11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 HPCAL4Q9UM19 191 aa11.21□□□□□ -0.61
TRAPPC2-201ENST00000359680 NID2Q14112 1375 aa11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 SYF2O95926 243 aaKnown RBP11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 CDC25AP30304 524 aa11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 COPB1P53618 953 aaKnown RBP11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 STIM1Q13586 685 aa11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 AKNAD1Q5T1N1 836 aa11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.62
TRAPPC2-201ENST00000359680 LDHAL6AQ6ZMR3 332 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms