RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 PIBF1Q8WXW3 757 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 USP28Q96RU2 1077 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 SCAND2PQ9GZW5 306 aaPredicted RBP13.9□□□□□ -0.18
SYN3-202ENST00000358763 ZNRF3Q9ULT6 936 aa13.9□□□□□ -0.18
SYN3-202ENST00000358763 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
SYN3-202ENST00000358763 HLA-DOAP06340 250 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 CLEC10AQ8IUN9 316 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 NEDD1Q8NHV4 660 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 TMEM47Q9BQJ4 181 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 RBM28Q9NW13 759 aaKnown RBP13.89□□□□□ -0.19
SYN3-202ENST00000358763 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 MYH6P13533 1939 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 DDTLA6NHG4 134 aaPredicted RBP13.89□□□□□ -0.19
SYN3-202ENST00000358763 DEXIO95424 95 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 VIL1P09327 827 aaKnown RBP13.89□□□□□ -0.19
SYN3-202ENST00000358763 AKR1B1P15121 316 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 FUT2Q10981 343 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 ZSCAN23Q3MJ62 389 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 CEP95Q96GE4 821 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 TCP11L1Q9NUJ3 509 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 KCNJ14Q9UNX9 436 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 MYH8P13535 1937 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 FER1L6Q2WGJ9 1857 aa13.89□□□□□ -0.19
SYN3-202ENST00000358763 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
SYN3-202ENST00000358763 PPP2R5BQ15173 497 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
SYN3-202ENST00000358763 WASF1Q92558 559 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 V9GY48 417 aaPredicted RBP13.88□□□□□ -0.19
SYN3-202ENST00000358763 MYO3BQ8WXR4 1341 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 CLRN2A0PK11 232 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 NT5C2P49902 561 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 EIF6P56537 245 aaKnown RBP13.88□□□□□ -0.19
SYN3-202ENST00000358763 RASSF7Q02833 373 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 CXCL9Q07325 125 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 GNL2Q13823 731 aaKnown RBP13.88□□□□□ -0.19
SYN3-202ENST00000358763 GMLQ99445 158 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 IDI2Q9BXS1 227 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 RNF26Q9BY78 433 aaPredicted RBP13.88□□□□□ -0.19
SYN3-202ENST00000358763 CNTNAP5Q8WYK1 1306 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 SHMT1P34896 483 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 STAG2Q8N3U4 1231 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 ANKS1AQ92625 1134 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.88□□□□□ -0.19
SYN3-202ENST00000358763 CFAP45Q9UL16 551 aa13.88□□□□□ -0.19
SYN3-202ENST00000358763 ELP1O95163 1332 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 CCDC178Q5BJE1 867 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 DNAJC18Q9H819 358 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 GAS2L3Q86XJ1 694 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 ZNF396Q96N95 335 aaPredicted RBP13.87□□□□□ -0.19
SYN3-202ENST00000358763 VPS33BQ9H267 617 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 VPS54Q9P1Q0 977 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 SIPA1L1O43166 1804 aa13.87□□□□□ -0.19
SYN3-202ENST00000358763 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 PKN1Q16512 942 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 MYSM1Q5VVJ2 828 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 BRAPQ7Z569 592 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 OGFOD1Q8N543 542 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 SHISA4Q96DD7 197 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 HDAC9Q9UKV0 1011 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 MPHOSPH10O00566 681 aaKnown RBP13.86□□□□□ -0.19
SYN3-202ENST00000358763 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 KIF5BP33176 963 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 DLGAP5Q15398 846 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 PGBD1Q96JS3 809 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 SYCE3A1L190 88 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 GOLGA6L4A6NEF3 574 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 GOLGA6L3A6NEY3 463 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 PRPF3O43395 683 aaKnown RBP13.86□□□□□ -0.19
SYN3-202ENST00000358763 SHROOM1Q2M3G4 852 aaPredicted RBP13.86□□□□□ -0.19
SYN3-202ENST00000358763 CLIC4Q9Y696 253 aa13.86□□□□□ -0.19
SYN3-202ENST00000358763 SRCAPQ6ZRS2 3230 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 BTBD18B2RXH4 712 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 MMP1P03956 469 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 GRM4Q14833 912 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 DIS3L2Q8IYB7 885 aaKnown RBP13.85□□□□□ -0.19
SYN3-202ENST00000358763 LRRC47Q8N1G4 583 aaKnown RBP13.85□□□□□ -0.19
SYN3-202ENST00000358763 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
SYN3-202ENST00000358763 MAD2L2Q9UI95 211 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 SOCS7O14512 581 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 EHD4Q9H223 541 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 CPVLQ9H3G5 476 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 MTMR4Q9NYA4 1195 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 PLIN4Q96Q06 1357 aa13.85□□□□□ -0.19
SYN3-202ENST00000358763 TOP1P11387 765 aaKnown RBP13.84□□□□□ -0.19
SYN3-202ENST00000358763 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
SYN3-202ENST00000358763 LIG1P18858 919 aa13.84□□□□□ -0.19
SYN3-202ENST00000358763 BICD2Q8TD16 824 aa13.84□□□□□ -0.19
SYN3-202ENST00000358763 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
SYN3-202ENST00000358763 TMOD2Q9NZR1 351 aa13.84□□□□□ -0.19
SYN3-202ENST00000358763 PI4KBQ9UBF8 816 aa13.84□□□□□ -0.19
SYN3-202ENST00000358763 ATP2B2Q01814 1243 aa13.84□□□□□ -0.19
SYN3-202ENST00000358763 NR5A1Q13285 461 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms