RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SPA17Q15506 151 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 MAP9Q49MG5 647 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC93Q567U6 631 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 FAM47AQ5JRC9 791 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 FCHSD1Q86WN1 690 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 GSPT2Q8IYD1 628 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 MICALL1Q8N3F8 863 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 LCORLQ8N3X6 602 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 ZHX3Q9H4I2 956 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 ADGRG1Q9Y653 693 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 FAM170AA1A519 330 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 CCDC151A5D8V7 595 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 FMNL1O95466 1100 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 PTPAQ15257 358 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 STRBPQ96SI9 672 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 HDAC6Q9UBN7 1215 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TRIM10Q9UDY6 481 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 MYO6Q9UM54 1294 aa7.42□□□□□ -1.22
CSDE1-203ENST00000358528 TTF2Q9UNY4 1162 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 RRP15Q9Y3B9 282 aaKnown RBP7.42□□□□□ -1.22
CSDE1-203ENST00000358528 NRXN3Q9Y4C0 1643 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 NCAPD2Q15021 1401 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 CACNA1FO60840 1977 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 HEG1Q9ULI3 1381 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 MAGEB6P1A0A0J9YX57 407 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 MYO1CO00159 1063 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PDE8BO95263 885 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 IDEP14735 1019 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 IL2RBP14784 551 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 BMP6P22004 513 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PTPREP23469 700 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 RNASE9P60153 205 aaKnown RBP7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PAK1Q13153 545 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 TDRD12Q587J7 1177 aaKnown RBP7.41□□□□□ -1.22
CSDE1-203ENST00000358528 CYP26C1Q6V0L0 522 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 DZIP3Q86Y13 1208 aaKnown RBP7.41□□□□□ -1.22
CSDE1-203ENST00000358528 FAM204AQ9H8W3 233 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 INTS13Q9NVM9 706 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 TMEM51Q9NW97 253 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 RFX7Q2KHR2 1363 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 KCNJ18B7U540 433 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 H3BQF6 201 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 ZPR1O75312 459 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 IFNAR1P17181 557 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 FXR1P51114 621 aaKnown RBP eCLIP7.41□□□□□ -1.221e-6■■■□□ 18.2
CSDE1-203ENST00000358528 CTSWP56202 376 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 VSNL1P62760 191 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 KCNJ12Q14500 433 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
CSDE1-203ENST00000358528 TMTC1Q8IUR5 882 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 TMTC2Q8N394 836 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 ZBTB38Q8NAP3 1195 aaPredicted RBP7.41□□□□□ -1.22
CSDE1-203ENST00000358528 TTLL11Q8NHH1 800 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 NKX2-3Q8TAU0 364 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 RASGRP4Q8TDF6 673 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 UIMC1Q96RL1 719 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 SEC31BQ9NQW1 1179 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PCDH11XQ9BZA7 1347 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PCDH11YQ9BZA8 1340 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 AKR1B10O60218 316 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 IVLP07476 585 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 MORC3Q14149 939 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 CASP8Q14790 479 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 GPATCH11Q8N954 259 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 PAGE5Q96GU1 130 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 GDAQ9Y2T3 454 aa7.41□□□□□ -1.22
CSDE1-203ENST00000358528 MYO1BO43795 1136 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 PLEKHA8P1O95397 391 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 ACTN2P35609 894 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 CASP7P55210 303 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 ARID5AQ03989 594 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 CRACR2BQ8N4Y2 399 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-203ENST00000358528 IGDCC4Q8TDY8 1250 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 LPIN2Q92539 896 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 CDK5RAP3Q96JB5 506 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 PNKPQ96T60 521 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 MMRN2Q9H8L6 949 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 FBXO2Q9UK22 296 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-203ENST00000358528 STX8Q9UNK0 236 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 TRIM49BA6NDI0 452 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 ZEB2O60315 1214 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 MFAP3LO75121 409 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 PCCAP05165 728 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-203ENST00000358528 COPB1P53618 953 aaKnown RBP7.4□□□□□ -1.22
CSDE1-203ENST00000358528 CYP27A1Q02318 531 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 SPAG1Q07617 926 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 PPARAQ07869 468 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 TBC1D8BQ0IIM8 1120 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 RASGRF1Q13972 1273 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 KRT31Q15323 416 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 UBE3CQ15386 1083 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 HEATR3Q7Z4Q2 680 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 ANKRD13CQ8N6S4 541 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 GOLGA5Q8TBA6 731 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 AFAP1L1Q8TED9 768 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 RIN2Q8WYP3 895 aaPredicted RBP7.4□□□□□ -1.22
CSDE1-203ENST00000358528 FUT8Q9BYC5 575 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 HPSEQ9Y251 543 aa7.4□□□□□ -1.22
CSDE1-203ENST00000358528 SRPRBQ9Y5M8 271 aaKnown RBP7.4□□□□□ -1.22
CSDE1-203ENST00000358528 EPN1Q9Y6I3 576 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms