RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 RBM43Q6ZSC3 357 aaKnown RBP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 FAM217BQ9NTX9 383 aaPredicted RBP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 RFX7Q2KHR2 1363 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 RHOXF2BP0C7M4 288 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 VEGFAP15692 232 aaPredicted RBP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 ARID4AP29374 1257 aaPredicted RBP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 LIFRP42702 1097 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 EARS2Q5JPH6 523 aaKnown RBP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 FKBP15Q5T1M5 1219 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
SIRPA-201ENST00000356025 AK7Q96M32 723 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 RHOXF2Q9BQY4 288 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 CDHR2Q9BYE9 1310 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
SIRPA-201ENST00000356025 SEC31AO94979 1220 aaKnown RBP13.79□□□□□ -0.2
SIRPA-201ENST00000356025 EVCP57679 992 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 FAM193AP78312 1265 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 RESP18Q5W5W9 173 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 SARM1Q6SZW1 724 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 NBPF11Q86T75 865 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 CAGE1Q8TC20 777 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 GUCA1BQ9UMX6 200 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 MED1Q15648 1581 aaPredicted RBP13.79□□□□□ -0.2
SIRPA-201ENST00000356025 PPP6R2O75170 966 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 UBXN1Q04323 297 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
SIRPA-201ENST00000356025 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 FAM84BQ96KN1 310 aaPredicted RBP13.79□□□□□ -0.2
SIRPA-201ENST00000356025 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 TRIM34Q9BYJ4 488 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 TACC3Q9Y6A5 838 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 SYNRGQ9UMZ2 1314 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 SOWAHDA6NJG2 315 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 CCP110O43303 1012 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 TOB1P50616 345 aaPredicted RBP13.79□□□□□ -0.2
SIRPA-201ENST00000356025 RAD51AP2Q09MP3 1159 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 MCM6Q14566 821 aa13.79□□□□□ -0.2
SIRPA-201ENST00000356025 RTL9Q8NET4 1388 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
SIRPA-201ENST00000356025 CAMTA2O94983 1202 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 KIF5BP33176 963 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 KRT222Q8N1A0 295 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 KIF5CO60282 957 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 NTRK3Q16288 839 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 CCDC96Q2M329 555 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 SPECC1LQ69YQ0 1117 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 RASGRP2Q7LDG7 609 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 SLF1Q9BQI6 1058 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 PPP2R2CQ9Y2T4 447 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 PHACTR2O75167 634 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 UFL1O94874 794 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 TOGARAM2Q6ZUX3 1019 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 IQUBQ8NA54 791 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 CAPZA3Q96KX2 299 aa13.78□□□□□ -0.2
SIRPA-201ENST00000356025 COL5A2P05997 1499 aaPredicted RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 AKR1B15C9JRZ8 316 aaPredicted RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.2
SIRPA-201ENST00000356025 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 ETF1P62495 437 aaKnown RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 PTPAQ15257 358 aa13.77□□□□□ -0.2
SIRPA-201ENST00000356025 KANK3Q6NY19 840 aa13.77□□□□□ -0.2
SIRPA-201ENST00000356025 VGLL2Q8N8G2 317 aa13.77□□□□□ -0.2
SIRPA-201ENST00000356025 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 ERO1AQ96HE7 468 aa13.77□□□□□ -0.2
SIRPA-201ENST00000356025 TMX4Q9H1E5 349 aaPredicted RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 IMPACTQ9P2X3 320 aa13.77□□□□□ -0.2
SIRPA-201ENST00000356025 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.2
SIRPA-201ENST00000356025 TCRBV5S4A2TA0A5A2 114 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
SIRPA-201ENST00000356025 ASIC1P78348 528 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 PPARDQ03181 441 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 KIAA1328Q86T90 577 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 STAG2Q8N3U4 1231 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 GDAP1L1Q96MZ0 367 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 FRMPD2Q68DX3 1309 aaPredicted RBP13.77□□□□□ -0.21
SIRPA-201ENST00000356025 CLSTN1O94985 981 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 PTPREP23469 700 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 CDC25BP30305 580 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 MLKLQ8NB16 471 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 STAG1Q8WVM7 1258 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 SMARCC1Q92922 1105 aaPredicted RBP13.77□□□□□ -0.21
SIRPA-201ENST00000356025 GDAQ9Y2T3 454 aa13.77□□□□□ -0.21
SIRPA-201ENST00000356025 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.77□□□□□ -0.21
SIRPA-201ENST00000356025 CASP14P31944 242 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 TXKP42681 527 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 TNNT3P45378 269 aaPredicted RBP13.76□□□□□ -0.21
SIRPA-201ENST00000356025 CTR9Q6PD62 1173 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 DTHD1Q6ZMT9 781 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 DYMQ7RTS9 669 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 SGMS1Q86VZ5 419 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 BAG3O95817 575 aa13.76□□□□□ -0.21
SIRPA-201ENST00000356025 TEX11Q8IYF3 940 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms