RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 RBL2Q08999 1139 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 PDCLQ13371 301 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 CUL5Q93034 780 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 COG3Q96JB2 828 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 MMS19Q96T76 1030 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 SIL1Q9H173 461 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 C15orf41Q9Y2V0 281 aa8.64□□□□□ -1.03
CCR9-201ENST00000355983 EME2A4GXA9 379 aaPredicted RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 LUC7L3O95232 432 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 FERP16591 822 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 MDH1P40925 334 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 MAGEA8P43361 318 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 GCLCP48506 637 aaPredicted RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 EIF4A2Q14240 407 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 RNF187Q5TA31 235 aaPredicted RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 BZW1Q7L1Q6 419 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 SPATA20Q8TB22 786 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCR9-201ENST00000355983 SLC39A2Q9NP94 309 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 ADD3Q9UEY8 706 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 ALKQ9UM73 1620 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 MINK1Q8N4C8 1332 aaPredicted RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 SH3TC1Q8TE82 1336 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 ATP6V1G2O95670 118 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 HOXB7P09629 217 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 FDPSP14324 419 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 CCNG1P51959 295 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 PDE4BQ07343 736 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 G3BP1Q13283 466 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCR9-201ENST00000355983 CDKAL1Q5VV42 579 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 SULT6B1Q6IMI4 303 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.63□□□□□ -1.03
CCR9-201ENST00000355983 PCDHA5Q9Y5H7 936 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 RPS6KL1Q9Y6S9 549 aa8.63□□□□□ -1.03
CCR9-201ENST00000355983 BCL9LQ86UU0 1499 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 A6NHS1 94 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PAEPP09466 180 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 BMP6P22004 513 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PDIA3P30101 505 aaKnown RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 ROR2Q01974 943 aaKnown RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 MTA1Q13330 715 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PNOCQ13519 176 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SAFB2Q14151 953 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCR9-201ENST00000355983 TBC1D25Q3MII6 688 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SPATA1Q5VX52 437 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 IQCKQ8N0W5 287 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 TEX9Q8N6V9 391 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 FSD1Q9BTV5 496 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 MAN1B1Q9UKM7 699 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 CFAP73A6NFT4 308 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 LRRC10BA6NIK2 292 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PPFIA2O75334 1257 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SETSIPP0DME0 302 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 ALADP13716 330 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 ATP2B2Q01814 1243 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 IFT88Q13099 833 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 OS9Q13438 667 aaPredicted RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 BLMHQ13867 455 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PTPAQ15257 358 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SKIDA1Q1XH10 827 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 CMPK2Q5EBM0 449 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SPECC1Q5M775 1068 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 BEND3Q5T5X7 828 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SHC4Q6S5L8 630 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 SND1Q7KZF4 910 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCR9-201ENST00000355983 ZNF589Q86UQ0 364 aaPredicted RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 RPUSD2Q8IZ73 545 aaKnown RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 EIF1ADQ8N9N8 165 aaKnown RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 CYFIP2Q96F07 1278 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 C8orf76Q96K31 380 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 C4BP0C0L5 1744 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PARP4Q9UKK3 1724 aaKnown RBP8.62□□□□□ -1.03
CCR9-201ENST00000355983 CPS1P31327 1500 aa8.62□□□□□ -1.03
CCR9-201ENST00000355983 PEAK1Q9H792 1746 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 CYP21A2P08686 494 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 NR1D1P20393 614 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 SCTRP47872 440 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 ERVK-24P63145 666 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 ELF3P78545 371 aaPredicted RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 KCNB1Q14721 858 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 SLC30A9Q6PML9 568 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 RBM12BQ8IXT5 1001 aaKnown RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 ARL8AQ96BM9 186 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 RNPC3Q96LT9 517 aaKnown RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 ALS2CR12Q96Q35 445 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 PURBQ96QR8 312 aaKnown RBP8.61□□□□□ -1.03
CCR9-201ENST00000355983 DSCC1Q9BVC3 393 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 OSBPL7Q9BZF2 842 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 CENPHQ9H3R5 247 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 NOD2Q9HC29 1040 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 ABHD10Q9NUJ1 306 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 IRAK4Q9NWZ3 460 aa8.61□□□□□ -1.03
CCR9-201ENST00000355983 CHCHD3Q9NX63 227 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms