RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 KCNJ6P48051 423 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 GLIPR1L2Q4G1C9 344 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 TMTC3Q6ZXV5 915 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 CTCFLQ8NI51 663 aaPredicted RBP25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 BCL11BQ9C0K0 894 aaPredicted RBP25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 VPS54Q9P1Q0 977 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 CTIFO43310 598 aaKnown RBP25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 SFPQP23246 707 aaKnown RBP eCLIP25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 SPECC1Q5M775 1068 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 MLKLQ8NB16 471 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 DLEC1Q9Y238 1755 aa25.49■■□□□ 1.67
NKX2-1-201ENST00000354822 PTPN14Q15678 1187 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 MYH13Q9UKX3 1938 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 PLEKHA8P1O95397 391 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 PRDX5P30044 214 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 SARSP49591 514 aaKnown RBP25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 UBASH3AP57075 661 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 CEP135Q66GS9 1140 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 FAM196AQ6ZSG2 479 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 CCAR2Q8N163 923 aaKnown RBP25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 SMARCE1Q969G3 411 aa25.48■■□□□ 1.67
NKX2-1-201ENST00000354822 KIF2AO00139 706 aaPredicted RBP25.47■■□□□ 1.67
NKX2-1-201ENST00000354822 SERPINC1P01008 464 aa25.47■■□□□ 1.67
NKX2-1-201ENST00000354822 GRIN1Q05586 938 aa25.47■■□□□ 1.67
NKX2-1-201ENST00000354822 FERMT2Q96AC1 680 aa25.47■■□□□ 1.67
NKX2-1-201ENST00000354822 SERTAD1Q9UHV2 236 aa25.47■■□□□ 1.67
NKX2-1-201ENST00000354822 ATP2B1P20020 1258 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 NYAP1Q6ZVC0 841 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 CSRNP2Q9H175 543 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 LEMD3Q9Y2U8 911 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 DZIP1Q86YF9 867 aaKnown RBP25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 CCDC24Q8N4L8 307 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 WDR66Q8TBY9 1149 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 MAN1B1Q9UKM7 699 aa25.46■■□□□ 1.67
NKX2-1-201ENST00000354822 NPHP1O15259 732 aa25.45■■□□□ 1.67
NKX2-1-201ENST00000354822 CT47A1Q5JQC4 288 aaPredicted RBP25.45■■□□□ 1.67
NKX2-1-201ENST00000354822 SHISA4Q96DD7 197 aa25.45■■□□□ 1.67
NKX2-1-201ENST00000354822 IRS2Q9Y4H2 1338 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 CCDC88AQ3V6T2 1871 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 ATP1A3P13637 1013 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 ADRA2BP18089 450 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 SYCP1Q15431 976 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 ARMCX5Q6P1M9 558 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 MAST2Q6P0Q8 1798 aa25.45■■□□□ 1.66
NKX2-1-201ENST00000354822 ACTN4O43707 911 aaKnown RBP25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 KIF5BP33176 963 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 CCDC112Q8NEF3 446 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 TNRC6CQ9HCJ0 1690 aaKnown RBP25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 FOXN1O15353 648 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 BMP6P22004 513 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 MORC3Q14149 939 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 SPATA20Q8TB22 786 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 LRRC4BQ9NT99 713 aa25.44■■□□□ 1.66
NKX2-1-201ENST00000354822 CNTNAP5Q8WYK1 1306 aa25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 PSDA5PKW4 1024 aaPredicted RBP25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 TSPY2A6NKD2 308 aa25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 TUBB4AP04350 444 aa25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 CFAP100Q494V2 611 aa25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 CCDC178Q5BJE1 867 aa25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 SRBD1Q8N5C6 995 aaKnown RBP25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 ENOX1Q8TC92 643 aaKnown RBP25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 FANCLQ9NW38 375 aa25.43■■□□□ 1.66
NKX2-1-201ENST00000354822 TRAPPC10P48553 1259 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 GSTO1P78417 241 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 GRAPQ13588 217 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 NFIXQ14938 502 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 TXNRD3Q86VQ6 643 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 ZNF710Q8N1W2 664 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 GRAPLQ8TC17 118 aaPredicted RBP25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 TNFRSF25Q93038 417 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 MCM9Q9NXL9 1143 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 ANKIB1Q9P2G1 1089 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 LAMB1P07942 1786 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 USP27XA6NNY8 438 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 LDHBP07195 334 aaKnown RBP25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 FAM47AQ5JRC9 791 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 DGKHQ86XP1 1220 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 TSC1Q92574 1164 aa25.42■■□□□ 1.66
NKX2-1-201ENST00000354822 SCG2P13521 617 aa25.41■■□□□ 1.66
NKX2-1-201ENST00000354822 QTRT2Q9H974 415 aaKnown RBP25.41■■□□□ 1.66
NKX2-1-201ENST00000354822 hCG_1642624A0A1W2PR95 340 aa25.41■■□□□ 1.66
NKX2-1-201ENST00000354822 CCP110O43303 1012 aa25.41■■□□□ 1.66
NKX2-1-201ENST00000354822 VSTM4Q8IW00 320 aa25.41■■□□□ 1.66
NKX2-1-201ENST00000354822 ANKS1AQ92625 1134 aa25.41■■□□□ 1.66
NKX2-1-201ENST00000354822 BAG3O95817 575 aa25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 SLFN14P0C7P3 912 aa25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 ERCC5P28715 1186 aaPredicted RBP25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 PFKFB3Q16875 520 aaPredicted RBP25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 EARS2Q5JPH6 523 aaKnown RBP25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 C12orf60Q5U649 245 aa25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 AMOTL1Q8IY63 956 aa25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 PDILTQ8N807 584 aa25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 UBR3Q6ZT12 1888 aa25.4■■□□□ 1.66
NKX2-1-201ENST00000354822 NMT2O60551 498 aa25.39■■□□□ 1.66
NKX2-1-201ENST00000354822 CYP2D6P10635 497 aa25.39■■□□□ 1.66
NKX2-1-201ENST00000354822 NPY5RQ15761 445 aa25.39■■□□□ 1.66
NKX2-1-201ENST00000354822 TTC38Q5R3I4 469 aa25.39■■□□□ 1.66
NKX2-1-201ENST00000354822 C15orf52Q6ZUT6 534 aaKnown RBP25.39■■□□□ 1.66
NKX2-1-201ENST00000354822 TRMT1Q9NXH9 659 aaKnown RBP25.39■■□□□ 1.66
NKX2-1-201ENST00000354822 MKRN1Q9UHC7 482 aaKnown RBP25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms