RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 RBM5P52756 815 aaKnown RBP eCLIP11.91□□□□□ -0.5
PKP1-202ENST00000352845 PSMD2Q13200 908 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 KCNB1Q14721 858 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 C6orf89Q6UWU4 347 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 ZBTB10Q96DT7 871 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 SPAG5Q96R06 1193 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 RUFY1Q96T51 708 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 SUDS3Q9H7L9 328 aaPredicted RBP11.91□□□□□ -0.5
PKP1-202ENST00000352845 EBF2Q9HAK2 575 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
PKP1-202ENST00000352845 C1orf167Q5SNV9 1468 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 UTYO14607 1347 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 CMA1P23946 247 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 MAGEA8P43361 318 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 XRCC4Q13426 336 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 PDIA5Q14554 519 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 STK38Q15208 465 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 MIS18BP1Q6P0N0 1132 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 KDM7AQ6ZMT4 941 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 Q6ZUG5 572 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 TRIM58Q8NG06 486 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 POLR3EQ9NVU0 708 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 LAMA4Q16363 1823 aa11.91□□□□□ -0.5
PKP1-202ENST00000352845 LMO7Q8WWI1 1683 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 MGRN1O60291 552 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 PPFIA3O75145 1194 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 FAM107AO95990 144 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 CHGBP05060 677 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 FECHP22830 423 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 LSP1P33241 339 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 PEX19P40855 299 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 TRAPPC11Q7Z392 1133 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 APLFQ8IW19 511 aaPredicted RBP11.9□□□□□ -0.5
PKP1-202ENST00000352845 AENQ8WTP8 325 aaKnown RBP11.9□□□□□ -0.5
PKP1-202ENST00000352845 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
PKP1-202ENST00000352845 TRPM3Q9HCF6 1732 aaPredicted RBP11.9□□□□□ -0.5
PKP1-202ENST00000352845 H7C1W4 665 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 SKAP2O75563 359 aaPredicted RBP11.9□□□□□ -0.51
PKP1-202ENST00000352845 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.51
PKP1-202ENST00000352845 PDCLQ13371 301 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 SLC30A9Q6PML9 568 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 RAD9BQ6WBX8 426 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.51
PKP1-202ENST00000352845 PPFIBP1Q86W92 1011 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 CCDC170Q8IYT3 715 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 NSUN7Q8NE18 718 aaKnown RBP11.9□□□□□ -0.51
PKP1-202ENST00000352845 RASSF8Q8NHQ8 419 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.51
PKP1-202ENST00000352845 DACH1Q9UI36 760 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 NCAPD2Q15021 1401 aa11.9□□□□□ -0.51
PKP1-202ENST00000352845 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 SPTLC2O15270 562 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 RPSAP08865 295 aaKnown RBP11.89□□□□□ -0.51
PKP1-202ENST00000352845 MTF1Q14872 753 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 CCDC38Q502W7 563 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 LACTB2Q53H82 288 aaPredicted RBP11.89□□□□□ -0.51
PKP1-202ENST00000352845 STOX1Q6ZVD7 989 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 BZW1Q7L1Q6 419 aaKnown RBP11.89□□□□□ -0.51
PKP1-202ENST00000352845 TRIM74Q86UV6 250 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 TRIM73Q86UV7 250 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 C1orf131Q8NDD1 294 aaKnown RBP11.89□□□□□ -0.51
PKP1-202ENST00000352845 RABEP2Q9H5N1 569 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 OVOS2A0A0G2JMS6 1433 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 ZNF609O15014 1411 aa11.89□□□□□ -0.51
PKP1-202ENST00000352845 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 GRM8O00222 908 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 PPP1R12BO60237 982 aaPredicted RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 HSF2BPO75031 334 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 PPP1R37O75864 691 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 CYP21A2P08686 494 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 FERP16591 822 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 ZNF18P17022 549 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 MST1RQ04912 1400 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 IFT88Q13099 833 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 G3BP1Q13283 466 aaKnown RBP eCLIP11.88□□□□□ -0.51
PKP1-202ENST00000352845 E2F5Q15329 346 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 PTGISQ16647 500 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 LMOD2Q6P5Q4 547 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 TMTC1Q8IUR5 882 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 NUTM2AQ8IVF1 878 aaPredicted RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 KLHDC4Q8TBB5 520 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 BUB1BO60566 1050 aaPredicted RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 DNAJC8O75937 253 aaPredicted RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 LUC7L3O95232 432 aaKnown RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 IMPDH2P12268 514 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 ROR2Q01974 943 aaKnown RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 RIPK1Q13546 671 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 SPECC1Q5M775 1068 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 CWF19L1Q69YN2 538 aaKnown RBP11.88□□□□□ -0.51
PKP1-202ENST00000352845 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
PKP1-202ENST00000352845 CCDC129Q6ZRS4 1044 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms