RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 LRRC47Q8N1G4 583 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 KCNH3Q9ULD8 1083 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 AKAP11Q9UKA4 1901 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 TOGARAM1Q9Y4F4 1720 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 TAF1P21675 1872 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 WNT7AO00755 349 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 VEGFAP15692 232 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 EARS2Q5JPH6 523 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 CLEC10AQ8IUN9 316 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 NOC3LQ8WTT2 800 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 MRFAP1L1Q96HT8 127 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 FRMPD2Q68DX3 1309 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 MMP10P09238 476 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 CMA1P23946 247 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 KIF5BP33176 963 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 TOB1P50616 345 aaPredicted RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 NAPAP54920 295 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 ZYXQ15942 572 aaKnown RBP11.87□□□□□ -0.51
SMPD4-201ENST00000351288 WDR66Q8TBY9 1149 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 SERTAD1Q9UHV2 236 aa11.87□□□□□ -0.51
SMPD4-201ENST00000351288 LAMB4A4D0S4 1761 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 DEXIO95424 95 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 FGFR2P21802 821 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMPD4-201ENST00000351288 TXLNAP40222 546 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 UBASH3AP57075 661 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 NCAPHQ15003 741 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 ABCC12Q96J65 1359 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 A0A1W2PQ27 194 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 A0A1W2PQ64 194 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 A0A1W2PQD8 194 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 BMP6P22004 513 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 NLRP12P59046 1061 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 PTPAQ15257 358 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
SMPD4-201ENST00000351288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.86□□□□□ -0.51
SMPD4-201ENST00000351288 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 KRI1Q8N9T8 703 aaKnown RBP11.85□□□□□ -0.51
SMPD4-201ENST00000351288 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 EPSTI1Q96J88 318 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 CDK5RAP3Q96JB5 506 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 SCAF8Q9UPN6 1271 aaKnown RBP11.85□□□□□ -0.51
SMPD4-201ENST00000351288 KRT2P35908 639 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 NOSTRINQ8IVI9 506 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 SMARCE1Q969G3 411 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 MAP3K14Q99558 947 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 BLZF1Q9H2G9 400 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 IDEP14735 1019 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 ADKP55263 362 aaKnown RBP11.85□□□□□ -0.51
SMPD4-201ENST00000351288 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-201ENST00000351288 PRR5LQ6MZQ0 368 aa11.85□□□□□ -0.51
SMPD4-201ENST00000351288 ENAHQ8N8S7 591 aaPredicted RBP11.85□□□□□ -0.51
SMPD4-201ENST00000351288 ADAMTS3O15072 1205 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 GPSM2P81274 684 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 ELF2Q15723 593 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 CEP131Q9UPN4 1083 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 UBA7P41226 1012 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 TNNI2P48788 182 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 GSTO1P78417 241 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 SHISA4Q96DD7 197 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 CCDC94Q9BW85 323 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-201ENST00000351288 EPC1Q9H2F5 836 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 DCP1AQ9NPI6 582 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-201ENST00000351288 SLIT2O94813 1529 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 FMR1Q06787 632 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMPD4-201ENST00000351288 GRAPQ13588 217 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 BARGINQ6ZT62 677 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 GRAPLQ8TC17 118 aaPredicted RBP11.84□□□□□ -0.51
SMPD4-201ENST00000351288 HSD3B7Q9H2F3 369 aa11.84□□□□□ -0.51
SMPD4-201ENST00000351288 PARP4Q9UKK3 1724 aaKnown RBP11.84□□□□□ -0.51
SMPD4-201ENST00000351288 SLURP2P0DP57 97 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 ATL3Q6DD88 541 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 CTR9Q6PD62 1173 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 EYA3Q99504 573 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 CSRNP2Q9H175 543 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 ZNF287Q9HBT7 754 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 SAMSN1Q9NSI8 373 aaKnown RBP11.83□□□□□ -0.51
SMPD4-201ENST00000351288 LRRC4BQ9NT99 713 aa11.83□□□□□ -0.51
SMPD4-201ENST00000351288 XDHP47989 1333 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 RASGRP2Q7LDG7 609 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 NSUN4Q96CB9 384 aaKnown RBP11.83□□□□□ -0.52
SMPD4-201ENST00000351288 DESI2Q9BSY9 194 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 USP40Q9NVE5 1235 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 DNAI1Q9UI46 699 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 KRBA2Q6ZNG9 492 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 MAP7D2Q96T17 732 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 RTL9Q8NET4 1388 aa11.83□□□□□ -0.52
SMPD4-201ENST00000351288 CAVIN2O95810 425 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 MMP1P03956 469 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 SF3B3Q15393 1217 aaKnown RBP11.82□□□□□ -0.52
SMPD4-201ENST00000351288 GRIK5Q16478 980 aa11.82□□□□□ -0.52
SMPD4-201ENST00000351288 XIRP1Q702N8 1843 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms