RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 MLKLQ8NB16 471 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 DNAJC25Q9H1X3 360 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 TMOD4Q9NZQ9 345 aa13.74□□□□□ -0.21
SMAD9-201ENST00000350148 AFMP43652 599 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 ITPK1Q13572 414 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 FAM47AQ5JRC9 791 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 PIK3AP1Q6ZUJ8 805 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 TMC6Q7Z403 805 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 RTEL1Q9NZ71 1219 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
SMAD9-201ENST00000350148 CLGNO14967 610 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 DKC1O60832 514 aaKnown RBP eCLIP13.73□□□□□ -0.21
SMAD9-201ENST00000350148 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 STK36Q9NRP7 1315 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 ZNF174Q15697 407 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 INTS5Q6P9B9 1019 aaKnown RBP13.73□□□□□ -0.21
SMAD9-201ENST00000350148 SV2BQ7L1I2 683 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 KIAA1328Q86T90 577 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 MYL10Q9BUA6 226 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 LAD1O00515 517 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 MYL5Q02045 173 aa13.73□□□□□ -0.21
SMAD9-201ENST00000350148 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
SMAD9-201ENST00000350148 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 CERKLQ49MI3 558 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 AOPEPQ8N6M6 819 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 CELF1Q92879 486 aaKnown RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 USO1O60763 962 aaKnown RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 CCDC172P0C7W6 258 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 CMA1P23946 247 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 KCNQ4P56696 695 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 N4BP3O15049 544 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 PPP6R2O75170 966 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 DOK7Q18PE1 504 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 FAM177A1Q8N128 213 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 TTLL6Q8N841 843 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 NUP88Q99567 741 aaPredicted RBP13.72□□□□□ -0.21
SMAD9-201ENST00000350148 KIF5CO60282 957 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 ZBED4O75132 1171 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 PI16Q6UXB8 463 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 KIF18AQ8NI77 898 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 GJA3Q9Y6H8 435 aa13.72□□□□□ -0.21
SMAD9-201ENST00000350148 A0A1B0GVL5 298 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 VWA3AA6NCI4 1184 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 PRPF3O43395 683 aaKnown RBP13.71□□□□□ -0.21
SMAD9-201ENST00000350148 FOXP4Q8IVH2 680 aaPredicted RBP13.71□□□□□ -0.21
SMAD9-201ENST00000350148 CCDC65Q8IXS2 484 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 CD209Q9NNX6 404 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 POLR3EQ9NVU0 708 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 ADD1P35611 737 aaKnown RBP13.71□□□□□ -0.21
SMAD9-201ENST00000350148 NLRP12P59046 1061 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 FMNL3Q8IVF7 1028 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 PDCL2Q8N4E4 241 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 ZNF202O95125 648 aa13.71□□□□□ -0.21
SMAD9-201ENST00000350148 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
SMAD9-201ENST00000350148 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.22
SMAD9-201ENST00000350148 MAGEF1Q9HAY2 307 aa13.71□□□□□ -0.22
SMAD9-201ENST00000350148 SAMM50Q9Y512 469 aa13.71□□□□□ -0.22
SMAD9-201ENST00000350148 KLRF2D3W0D1 207 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 RUFY1Q96T51 708 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 UBA5Q9GZZ9 404 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 TRIML1Q8N9V2 468 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 EHBP1Q8NDI1 1231 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 KANSL2Q9H9L4 492 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 TTLL1O95922 423 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 FOSP01100 380 aaPredicted RBP13.7□□□□□ -0.22
SMAD9-201ENST00000350148 SYNE4Q8N205 404 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 FAM84BQ96KN1 310 aaPredicted RBP13.7□□□□□ -0.22
SMAD9-201ENST00000350148 TIGD1Q96MW7 591 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 SH3GLB2Q9NR46 395 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 SERPINB13Q9UIV8 391 aa13.7□□□□□ -0.22
SMAD9-201ENST00000350148 MATR3P43243 847 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 C17orf53Q8N3J3 647 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 FNBP4Q8N3X1 1017 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 VPS54Q9P1Q0 977 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 VGLL3A8MV65 326 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 CD2BP2O95400 341 aaKnown RBP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 KIAA0825Q8IV33 1275 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 MROH7-TTC4A0A0A0MT08 1334 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 KDM3AQ9Y4C1 1321 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 KIAA0754O94854 1291 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 DESP17661 470 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 OTUD7BQ6GQQ9 843 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 CLEC17AQ6ZS10 378 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
SMAD9-201ENST00000350148 NT5C3AQ9H0P0 336 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 PI4KBQ9UBF8 816 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 ERLIN1O75477 346 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 SYCP3Q8IZU3 236 aa13.69□□□□□ -0.22
SMAD9-201ENST00000350148 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms