RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ERCC6LQ2NKX8 1250 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 RCSD1Q6JBY9 416 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 STAG2Q8N3U4 1231 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 NSUN4Q96CB9 384 aaKnown RBP6.95□□□□□ -1.3
CLCN3-201ENST00000347613 DYNLL2Q96FJ2 89 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 PHF20Q9BVI0 1012 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 IL17RBQ9NRM6 502 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 FAM205AQ6ZU69 1335 aa6.95□□□□□ -1.3
CLCN3-201ENST00000347613 USP17L8P0C7I0 530 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 TBX2Q13207 712 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 MORC3Q14149 939 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 CCDC152Q4G0S7 254 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 KRI1Q8N9T8 703 aaKnown RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 TC2NQ8N9U0 490 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 RASGRP4Q8TDF6 673 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 TIGD1Q96MW7 591 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 WDR24Q96S15 920 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 DESI2Q9BSY9 194 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 MYH8P13535 1937 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 VWA3AA6NCI4 1184 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 CUTAO60888 179 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 CAVIN2O95810 425 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 POSTNQ15063 836 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 LRRFIP1Q32MZ4 808 aaKnown RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 VSTM4Q8IW00 320 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 FAM177A1Q8N128 213 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 SLC44A5Q8NCS7 719 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 SPATA20Q8TB22 786 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 BLZF1Q9H2G9 400 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 ZHX1Q9UKY1 873 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 SPATA31A5Q5VU36 1347 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 SPATA31A7Q8IWB4 1347 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 STK36Q9NRP7 1315 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 IKBKBO14920 756 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 IGHMBP2P38935 993 aaKnown RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 GNL2Q13823 731 aaKnown RBP6.94□□□□□ -1.3
CLCN3-201ENST00000347613 NT5DC1Q5TFE4 455 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 DHX58Q96C10 678 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 KCND1Q9NSA2 647 aa6.94□□□□□ -1.3
CLCN3-201ENST00000347613 PP2D1A8MPX8 630 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 NFIXQ14938 502 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 CCDC112Q8NEF3 446 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 SYMPKQ92797 1274 aaKnown RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 DCP1AQ9NPI6 582 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 ANAPC4Q9UJX5 808 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 NFE2L3Q9Y4A8 694 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 SRPRBQ9Y5M8 271 aaKnown RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 CDK5RAP2Q96SN8 1893 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 FGRP09769 529 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 MYL5Q02045 173 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 CFAP100Q494V2 611 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 FBXO33Q7Z6M2 555 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 GPKOWQ92917 476 aaPredicted RBP eCLIP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 EEF2KMTQ96G04 330 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 KRT23Q9C075 422 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 FOXP1Q9H334 677 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 MRPL44Q9H9J2 332 aaKnown RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 XDHP47989 1333 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 PPP1R3GB7ZBB8 358 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 SERPINC1P01008 464 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 DIXDC1Q155Q3 683 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 SH3RF1Q7Z6J0 888 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 PAGE5Q96GU1 130 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 NAT10Q9H0A0 1025 aaKnown RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 BSDC1Q9NW68 430 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-201ENST00000347613 TFR2Q9UP52 801 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 MAPK8IP1Q9UQF2 711 aa6.93□□□□□ -1.3
CLCN3-201ENST00000347613 USP17L3A6NCW0 530 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 USP17L4A6NCW7 530 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 CYTH3O43739 400 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 DEXIO95424 95 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 PLCD1P51178 756 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 CHAF1AQ13111 956 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-201ENST00000347613 CUL4BQ13620 913 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 SF3B3Q15393 1217 aaKnown RBP6.92□□□□□ -1.3
CLCN3-201ENST00000347613 USP17L1Q7RTZ2 530 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 KIF18AQ8NI77 898 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 L2HGDHQ9H9P8 463 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
CLCN3-201ENST00000347613 RTL9Q8NET4 1388 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 LAMB1P07942 1786 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 CDKL5O76039 1030 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 PMS1P54277 932 aaKnown RBP6.92□□□□□ -1.3
CLCN3-201ENST00000347613 NR1I3Q14994 352 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 E2F4Q16254 413 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 KLHL10Q6JEL2 608 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 C4orf32Q8N8J7 132 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 CNNM2Q9H8M5 875 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 IMPACTQ9P2X3 320 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 DNAI1Q9UI46 699 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 MTMR7Q9Y216 660 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 PAXBP1Q9Y5B6 917 aa6.92□□□□□ -1.3
CLCN3-201ENST00000347613 AHDC1Q5TGY3 1603 aaPredicted RBP6.92□□□□□ -1.3
CLCN3-201ENST00000347613 SFPQP23246 707 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLCN3-201ENST00000347613 PTGDRQ13258 359 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms