RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 ANGEL1Q9UNK9 670 aaKnown RBP17.28■□□□□ 0.36
LMNA-201ENST00000347559 PCDHB6Q9Y5E3 794 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 TECPR2O15040 1411 aa17.28■□□□□ 0.36
LMNA-201ENST00000347559 FOXP2O15409 715 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 KIAA1328Q86T90 577 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 SH2D3CQ8N5H7 860 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.36
LMNA-201ENST00000347559 CSRNP2Q9H175 543 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 REXO2Q9Y3B8 237 aaKnown RBP17.27■□□□□ 0.36
LMNA-201ENST00000347559 GOLGA8AA7E2F4 631 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 ACTN4O43707 911 aaKnown RBP17.27■□□□□ 0.36
LMNA-201ENST00000347559 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.36
LMNA-201ENST00000347559 KRT31Q15323 416 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 SAFBQ15424 915 aaKnown RBP eCLIP17.27■□□□□ 0.36
LMNA-201ENST00000347559 EZH2Q15910 746 aaKnown RBP17.27■□□□□ 0.36
LMNA-201ENST00000347559 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
LMNA-201ENST00000347559 FBXL16Q8N461 479 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 ARL8AQ96BM9 186 aa17.27■□□□□ 0.36
LMNA-201ENST00000347559 MYH8P13535 1937 aa17.27■□□□□ 0.35
LMNA-201ENST00000347559 PDE2AO00408 941 aaPredicted RBP17.27■□□□□ 0.35
LMNA-201ENST00000347559 PTPREP23469 700 aa17.27■□□□□ 0.35
LMNA-201ENST00000347559 ACTN3Q08043 901 aaPredicted RBP17.27■□□□□ 0.35
LMNA-201ENST00000347559 CYB5R4Q7L1T6 521 aa17.27■□□□□ 0.35
LMNA-201ENST00000347559 ESF1Q9H501 851 aaKnown RBP17.27■□□□□ 0.35
LMNA-201ENST00000347559 RANBP6O60518 1105 aaKnown RBP17.26■□□□□ 0.35
LMNA-201ENST00000347559 GPTP24298 496 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 SLC7A5Q01650 507 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 NR5A1Q13285 461 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 HDAC7Q8WUI4 952 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 PUS7LQ9H0K6 701 aaKnown RBP17.26■□□□□ 0.35
LMNA-201ENST00000347559 PTPRUQ92729 1446 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 B4E1Z4 1266 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 ZBTB43O43298 467 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 CKAP4Q07065 602 aaKnown RBP17.26■□□□□ 0.35
LMNA-201ENST00000347559 B4GALNT4Q76KP1 1039 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 RPAINQ86UA6 219 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 N4BP2L2Q92802 583 aaPredicted RBP17.26■□□□□ 0.35
LMNA-201ENST00000347559 EPSTI1Q96J88 318 aa17.26■□□□□ 0.35
LMNA-201ENST00000347559 UBN2Q6ZU65 1347 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 LRRC24Q50LG9 513 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 CDKAL1Q5VV42 579 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 FAM184BQ9ULE4 1060 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 MAPK8IP1Q9UQF2 711 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 MACROD2A1Z1Q3 448 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 TARSL2A2RTX5 802 aaKnown RBP17.25■□□□□ 0.35
LMNA-201ENST00000347559 SSBP05455 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
LMNA-201ENST00000347559 GUCY1A2P33402 732 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 PPARAQ07869 468 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 PPP2R5AQ15172 486 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 KANK3Q6NY19 840 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 CEP57Q86XR8 500 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
LMNA-201ENST00000347559 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
LMNA-201ENST00000347559 PSMD14O00487 310 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 MEFVO15553 781 aaPredicted RBP17.25■□□□□ 0.35
LMNA-201ENST00000347559 IDEP14735 1019 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 NF2P35240 595 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 UBXN1Q04323 297 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 CUL4BQ13620 913 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
LMNA-201ENST00000347559 HAUS4Q9H6D7 363 aa17.25■□□□□ 0.35
LMNA-201ENST00000347559 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
LMNA-201ENST00000347559 DPYDQ12882 1025 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 NEDD9Q14511 834 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 PSMB7Q99436 277 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 INCENPQ9NQS7 918 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 MRC1P22897 1456 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 GOLGA8KD6RF30 607 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 FNTAP49354 379 aa17.24■□□□□ 0.35
LMNA-201ENST00000347559 TSR1Q2NL82 804 aaKnown RBP17.24■□□□□ 0.35
LMNA-201ENST00000347559 DMGDHQ9UI17 866 aaKnown RBP17.24■□□□□ 0.35
LMNA-201ENST00000347559 A0A087X0B3 334 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 OPA1O60313 960 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 ELF1P32519 619 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 RRAGBQ5VZM2 374 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 PI16Q6UXB8 463 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 ATG9AQ7Z3C6 839 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 BLZF1Q9H2G9 400 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 NEO1Q92859 1461 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 FRMD3A2A2Y4 597 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 GPAA1O43292 621 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 COPB1P53618 953 aaKnown RBP17.23■□□□□ 0.35
LMNA-201ENST00000347559 TTMPQ5BVD1 217 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 LRRC1Q9BTT6 524 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 CABP5Q9NP86 173 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 DUSP10Q9Y6W6 482 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 CHUKO15111 745 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 SH3GL2Q99962 352 aa17.23■□□□□ 0.35
LMNA-201ENST00000347559 TTC26A0AVF1 554 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 HERVK_113P62684 666 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 GUCY1A3Q02108 690 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 TSEN2Q8NCE0 465 aaKnown RBP17.22■□□□□ 0.35
LMNA-201ENST00000347559 AENQ8WTP8 325 aaKnown RBP17.22■□□□□ 0.35
LMNA-201ENST00000347559 ODF2LQ9ULJ1 636 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 AMOTL2Q9Y2J4 779 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 PPP1R3GB7ZBB8 358 aa17.22■□□□□ 0.35
LMNA-201ENST00000347559 HSF2BPO75031 334 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms