RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 GPSM2P81274 684 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SP4Q02446 784 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SLC39A14Q15043 492 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 POSTNQ15063 836 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 MROH7-TTC4A0A0A0MT08 1334 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SPATA31A5Q5VU36 1347 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SPATA31A7Q8IWB4 1347 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 CDHR2Q9BYE9 1310 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SORBS3O60504 671 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 CHRNA5P30532 468 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SNW1Q13573 536 aaKnown RBP15.14■□□□□ 0.01
CASC4-202ENST00000345795 PLS1Q14651 629 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 PPP4R3BQ5MIZ7 849 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 TEX35Q5T0J7 233 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 SHC4Q6S5L8 630 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 ILDR1Q86SU0 546 aaPredicted RBP15.14■□□□□ 0.01
CASC4-202ENST00000345795 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
CASC4-202ENST00000345795 TAB2Q9NYJ8 693 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 TAL1P17542 331 aaPredicted RBP15.13■□□□□ 0.01
CASC4-202ENST00000345795 TECP42680 631 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 MYL5Q02045 173 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 RILPL1Q5EBL4 403 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 MAEAQ7L5Y9 396 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 GJD4Q96KN9 370 aaPredicted RBP15.13■□□□□ 0.01
CASC4-202ENST00000345795 ZBTB21Q9ULJ3 1066 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 CTDP1Q9Y5B0 961 aaPredicted RBP15.13■□□□□ 0.01
CASC4-202ENST00000345795 CHMP2AO43633 222 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 PDCL2Q8N4E4 241 aa15.13■□□□□ 0.01
CASC4-202ENST00000345795 MAGEC2Q9UBF1 373 aaPredicted RBP15.13■□□□□ 0.01
CASC4-202ENST00000345795 RAD17O75943 681 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 PTPROQ16827 1216 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 NBPF11Q86T75 865 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 NSUN4Q96CB9 384 aaKnown RBP15.12■□□□□ 0.01
CASC4-202ENST00000345795 BCL9O00512 1426 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 TCP10L2B9ZVM9 353 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 MMP1P03956 469 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 CALM1P0DP23 149 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 CALM2P0DP24 149 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 CALM3P0DP25 149 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 EARS2Q5JPH6 523 aaKnown RBP15.12■□□□□ 0.01
CASC4-202ENST00000345795 KCNF1Q9H3M0 494 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 FBXO3Q9UK99 471 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 YEATS4O95619 227 aa15.12■□□□□ 0.01
CASC4-202ENST00000345795 PARP1P09874 1014 aaKnown RBP15.12■□□□□ 0.01
CASC4-202ENST00000345795 PDIA4P13667 645 aaKnown RBP15.12■□□□□ 0.01
CASC4-202ENST00000345795 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
CASC4-202ENST00000345795 WDR66Q8TBY9 1149 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 DPF2Q92785 391 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 HOMER2Q9NSB8 354 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 TCP11L1Q9NUJ3 509 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 TCEAL9Q9UHQ7 104 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 RGPD5Q99666 1765 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 KRT27Q7Z3Y8 459 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 CCDC84Q86UT8 332 aaPredicted RBP15.11■□□□□ 0.01
CASC4-202ENST00000345795 VGLL2Q8N8G2 317 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 HPS3Q969F9 1004 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 CHMP4BP1P59074 171 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 SF3B2Q13435 895 aaKnown RBP15.11■□□□□ 0.01
CASC4-202ENST00000345795 UBE2SQ16763 222 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 PRR5LQ6MZQ0 368 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 TMEM87AQ8NBN3 555 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 FEZ1Q99689 392 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 KCNQ5Q9NR82 932 aa15.11■□□□□ 0.01
CASC4-202ENST00000345795 IPO7O95373 1038 aaKnown RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 FMNL1O95466 1100 aaPredicted RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 IFNAR1P17181 557 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 EPS15P42566 896 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 ARHGAP29Q52LW3 1261 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 KRBA2Q6ZNG9 492 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 MIGA2Q7L4E1 593 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 FMR1NBQ8N0W7 255 aaPredicted RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 SRBD1Q8N5C6 995 aaKnown RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 CCDC47Q96A33 483 aaKnown RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 PIGSQ96S52 555 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 PSMB7Q99436 277 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 RTL9Q8NET4 1388 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 SMCO2A6NFE2 343 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 SCG2P13521 617 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 MTIF2P46199 727 aaKnown RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 LRRC4BQ9NT99 713 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.1■□□□□ 0.01
CASC4-202ENST00000345795 TACC3Q9Y6A5 838 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 CMA1P23946 247 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 PLA2G12BQ9BX93 195 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 CD209Q9NNX6 404 aa15.1■□□□□ 0.01
CASC4-202ENST00000345795 KIF18AQ8NI77 898 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 PDLIM2Q96JY6 352 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 U2AF2P26368 475 aaKnown RBP eCLIP15.09■□□□□ 0.014e-6■■■■□ 26.4
CASC4-202ENST00000345795 MATR3P43243 847 aaKnown RBP eCLIP15.09■□□□□ 0.01
CASC4-202ENST00000345795 TCERG1LQ5VWI1 586 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 CPXCR1Q8N123 301 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 CCDC43Q96MW1 224 aaKnown RBP15.09■□□□□ 0.01
CASC4-202ENST00000345795 PUF60Q9UHX1 559 aaKnown RBP15.09■□□□□ 0.01
CASC4-202ENST00000345795 PCDHAC2Q9Y5I4 1007 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 DDX39AO00148 427 aaKnown RBP15.09■□□□□ 0.01
CASC4-202ENST00000345795 NLRP12P59046 1061 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms