RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 C12orf60Q5U649 245 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 ACER1Q8TDN7 264 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 PXYLP1Q8TE99 480 aa20.35■□□□□ 0.85
CD55-202ENST00000343420 BIN2Q9UBW5 565 aaPredicted RBP20.35■□□□□ 0.85
CD55-202ENST00000343420 USP17L12C9JPN9 530 aa20.34■□□□□ 0.85
CD55-202ENST00000343420 USP17L21D6R901 530 aa20.34■□□□□ 0.85
CD55-202ENST00000343420 MPHOSPH10O00566 681 aaKnown RBP20.34■□□□□ 0.85
CD55-202ENST00000343420 RNF113AO15541 343 aaKnown RBP20.34■□□□□ 0.85
CD55-202ENST00000343420 SLC44A5Q8NCS7 719 aa20.34■□□□□ 0.85
CD55-202ENST00000343420 DYNLL2Q96FJ2 89 aa20.34■□□□□ 0.85
CD55-202ENST00000343420 STRBPQ96SI9 672 aaKnown RBP20.34■□□□□ 0.85
CD55-202ENST00000343420 USP17L15C9J2P7 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L13C9JLJ4 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L11C9JVI0 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L18D6R9N7 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L22D6RA61 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L17D6RBQ6 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L19D6RCP7 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L20D6RJB6 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 ZFYP08048 801 aaPredicted RBP20.33■□□□□ 0.85
CD55-202ENST00000343420 USP17L24Q0WX57 530 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 LRRFIP1Q32MZ4 808 aaKnown RBP20.33■□□□□ 0.85
CD55-202ENST00000343420 TMEM179Q6ZVK1 233 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 GPRC5AQ8NFJ5 357 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 PI4K2BQ8TCG2 481 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 APPBP2Q92624 585 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 TXNRD2Q9NNW7 524 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 RBPJLQ9UBG7 517 aa20.33■□□□□ 0.85
CD55-202ENST00000343420 MKI67P46013 3256 aaKnown RBP20.33■□□□□ 0.85
CD55-202ENST00000343420 PLXNB2O15031 1838 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 GLRX3O76003 335 aaKnown RBP20.32■□□□□ 0.84
CD55-202ENST00000343420 CCL5P13501 91 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 VCAM1P19320 739 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 CDK8P49336 464 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 HDAC1Q13547 482 aaPredicted RBP20.32■□□□□ 0.84
CD55-202ENST00000343420 AAMPQ13685 434 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 PRPF38BQ5VTL8 546 aaKnown RBP20.32■□□□□ 0.84
CD55-202ENST00000343420 CATSPERGQ6ZRH7 1159 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 OTUD7AQ8TE49 926 aaPredicted RBP20.32■□□□□ 0.84
CD55-202ENST00000343420 OSBP2Q969R2 916 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 GCC1Q96CN9 775 aa20.32■□□□□ 0.84
CD55-202ENST00000343420 ZBTB47Q9UFB7 747 aaPredicted RBP20.32■□□□□ 0.84
CD55-202ENST00000343420 ELNP15502 786 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 MX1P20591 662 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 ERVK-24P63145 666 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 CTR9Q6PD62 1173 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 C16orf86Q6ZW13 317 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 NKX2-3Q8TAU0 364 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 CCDC17Q96LX7 622 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 ARPP21Q9UBL0 812 aaPredicted RBP20.31■□□□□ 0.84
CD55-202ENST00000343420 GJD2Q9UKL4 321 aa20.31■□□□□ 0.84
CD55-202ENST00000343420 A0A1W2PRG0 241 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 SMIM22K7EJ46 135 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 PEX10O60683 326 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 GJB1P08034 283 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 AKR1B1P15121 316 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 Q3C1V9 767 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 ANKRD45Q5TZF3 282 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 GIMAP6Q6P9H5 292 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 RNF208Q9H0X6 261 aa20.3■□□□□ 0.84
CD55-202ENST00000343420 GSG1L2A8MUP6 293 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 INHAP05111 366 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 MAPK4P31152 587 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 SBK1Q52WX2 424 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 POTEEQ6S8J3 1075 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 PAGR1Q9BTK6 254 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
CD55-202ENST00000343420 RABGAP1Q9Y3P9 1069 aa20.29■□□□□ 0.84
CD55-202ENST00000343420 SALL3Q9BXA9 1300 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 GPAA1O43292 621 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 GNAT2P19087 354 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 GJA8P48165 433 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 LBX2Q6XYB7 198 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 UNC93B1Q9H1C4 597 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 ARHGEF10LQ9HCE6 1279 aa20.28■□□□□ 0.84
CD55-202ENST00000343420 ICA1Q05084 483 aa20.27■□□□□ 0.84
CD55-202ENST00000343420 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.84
CD55-202ENST00000343420 SHISA4Q96DD7 197 aa20.27■□□□□ 0.84
CD55-202ENST00000343420 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
CD55-202ENST00000343420 SH2D4AQ9H788 454 aa20.27■□□□□ 0.84
CD55-202ENST00000343420 RLFQ13129 1914 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 M0R2C6 588 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 CNMDO75829 334 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 CCNA1P78396 465 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 SIAH1Q8IUQ4 282 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 SOCS4Q8WXH5 440 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 NUDT12Q9BQG2 462 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 PORCNQ9H237 461 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 TMX2Q9Y320 296 aa20.26■□□□□ 0.83
CD55-202ENST00000343420 SPDYE16A6NNV3 312 aaPredicted RBP20.25■□□□□ 0.83
CD55-202ENST00000343420 HMGCRP04035 888 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 COG2Q14746 738 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 GPR142Q7Z601 462 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 CLEC10AQ8IUN9 316 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 U2AF1L4Q8WU68 220 aaKnown RBP20.25■□□□□ 0.83
CD55-202ENST00000343420 LPAR1Q92633 364 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 HOXC10Q9NYD6 342 aa20.25■□□□□ 0.83
CD55-202ENST00000343420 STAP2Q9UGK3 403 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms