RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 FGRP09769 529 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PCP11498 1178 aaKnown RBP15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 RASA1P20936 1047 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 HOXA7P31268 230 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 HMGCS2P54868 508 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 SEPT2Q15019 361 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ZNF296Q8WUU4 475 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 R3HDMLQ9H3Y0 253 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 KANSL2Q9H9L4 492 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 TMOD4Q9NZQ9 345 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PNMA3Q9UL41 463 aa15.57■□□□□ 0.08
HLA-DQA1-201ENST00000343139 MPHOSPH10O00566 681 aaKnown RBP15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 FKTNO75072 461 aa15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 AKR1B1P15121 316 aa15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 USP17L2Q6R6M4 530 aa15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 GADL1Q6ZQY3 521 aa15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 SH2D4AQ9H788 454 aa15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ADGRA2Q96PE1 1338 aa15.56■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PLIN4Q96Q06 1357 aa15.55■□□□□ 0.08
HLA-DQA1-201ENST00000343139 COL13A1Q5TAT6 717 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ZNF444Q8N0Y2 327 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQA1-201ENST00000343139 EMILIN3Q9NT22 766 aa15.55■□□□□ 0.08
HLA-DQA1-201ENST00000343139 SYNPO2Q9UMS6 1093 aa15.55■□□□□ 0.08
HLA-DQA1-201ENST00000343139 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.55■□□□□ 0.08
HLA-DQA1-201ENST00000343139 BAZ2AQ9UIF9 1905 aaKnown RBP15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ICA1Q05084 483 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 PPP4R3BQ5MIZ7 849 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 TREML2Q5T2D2 321 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 C17orf99Q6UX52 265 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ARHGEF10LQ9HCE6 1279 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 CTNNA3Q9UI47 895 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 TMX2Q9Y320 296 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ATAD5Q96QE3 1844 aa15.54■□□□□ 0.08
HLA-DQA1-201ENST00000343139 IGKV6D-41A0A0C4DH26 115 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 SGSM2O43147 1006 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ORC4O43929 436 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 SP3Q02447 781 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 SIAH1Q8IUQ4 282 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ACER1Q8TDN7 264 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 LPAR1Q92633 364 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 FEZ1Q99689 392 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 OSBPP22059 807 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 NEDD1Q8NHV4 660 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 GTF3C2Q8WUA4 911 aaPredicted RBP15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 LOC285556D6RIA3 1793 aa15.53■□□□□ 0.08
HLA-DQA1-201ENST00000343139 CYP2C8P10632 490 aa15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 BCRP11274 1271 aa15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 GCLCP48506 637 aaPredicted RBP15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ARHGEF6Q15052 776 aa15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 PKN2Q16513 984 aaKnown RBP15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CTU1Q7Z7A3 348 aaKnown RBP15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 MKL1Q969V6 931 aa15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 IL25Q9H293 177 aa15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 RNF41Q9H4P4 317 aaPredicted RBP15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 PTPRFP10586 1907 aa15.52■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ZNF213O14771 459 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 PRDM1O75626 825 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 GNRH1P01148 92 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 VCAM1P19320 739 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 SMCR8Q8TEV9 937 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 STAG1Q8WVM7 1258 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 ASCC2Q9H1I8 757 aaPredicted RBP15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 MTMR4Q9NYA4 1195 aa15.51■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TSPY3P0CV98 308 aa15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TSPY8P0CW00 308 aa15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 EEF2P13639 858 aaKnown RBP15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CTDSPL2Q05D32 466 aa15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 IMMTQ16891 758 aaKnown RBP15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 AKNAD1Q5T1N1 836 aa15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 LBX2Q6XYB7 198 aa15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 VCPKMTQ9H867 229 aa15.5■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TTLL1O95922 423 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 NOVP48745 357 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TFAP4Q01664 338 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 DGKZQ13574 1117 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 FAM110CQ1W6H9 321 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 CATSPERGQ6ZRH7 1159 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 MFSD6Q6ZSS7 791 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 STK11IPQ8N1F8 1099 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 GOPCQ9HD26 462 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TCP11L1Q9NUJ3 509 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 GREB1LQ9C091 1923 aaPredicted RBP15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 WDR46O15213 610 aaKnown RBP15.49■□□□□ 0.07
HLA-DQA1-201ENST00000343139 KIF22Q14807 665 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms