RNA–Protein interactions for RNA: ENST00000342905.10

NLRC4-201, Transcript of NLR family CARD domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene NLRC4, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-201ENST00000342905 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 USP17L21D6R901 530 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 FOXN1O15353 648 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 HMGB1P09429 215 aaKnown RBP10.26□□□□□ -0.77
NLRC4-201ENST00000342905 CYP2D6P10635 497 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 MCM2P49736 904 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 SBK1Q52WX2 424 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 AKNAD1Q5T1N1 836 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 MIGA2Q7L4E1 593 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 SH3BP5LQ7L8J4 393 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 MAPKAPK5Q8IW41 473 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 MB21D2Q8IYB1 491 aaPredicted RBP10.26□□□□□ -0.77
NLRC4-201ENST00000342905 NCOA7Q8NI08 942 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 STAG1Q8WVM7 1258 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 ALDH8A1Q9H2A2 487 aaPredicted RBP10.26□□□□□ -0.77
NLRC4-201ENST00000342905 DHX36Q9H2U1 1008 aaKnown RBP10.26□□□□□ -0.77
NLRC4-201ENST00000342905 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 ARPP21Q9UBL0 812 aaPredicted RBP10.26□□□□□ -0.77
NLRC4-201ENST00000342905 ZNF112Q9UJU3 913 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 ANAPC4Q9UJX5 808 aa10.26□□□□□ -0.77
NLRC4-201ENST00000342905 DOCK1Q14185 1865 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 FLT1P17948 1338 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 ROBO3Q96MS0 1386 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 DDTLA6NHG4 134 aaPredicted RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 SPDYE5A6NIY4 337 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 B4E1Z4 1266 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 INHBEP58166 350 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 ANTXR2P58335 489 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 EXOSC10Q01780 885 aaKnown RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 MAP3K10Q02779 954 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 TOB2Q14106 344 aaPredicted RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 Q6ZUG5 572 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 DHX32Q7L7V1 743 aaKnown RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 RALYLQ86SE5 291 aaKnown RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 STK11IPQ8N1F8 1099 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 OPTNQ96CV9 577 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 LARP6Q9BRS8 491 aaKnown RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 LRRC2Q9BYS8 371 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 ELP3Q9H9T3 547 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 MCM9Q9NXL9 1143 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 SAP30BPQ9UHR5 308 aaKnown RBP10.25□□□□□ -0.77
NLRC4-201ENST00000342905 SNCAIPQ9Y6H5 919 aa10.25□□□□□ -0.77
NLRC4-201ENST00000342905 TBC1D12O60347 775 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 LARGE1O95461 756 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 TM4SF4P48230 202 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 TRDNQ13061 729 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 MKRN3Q13064 507 aaKnown RBP10.24□□□□□ -0.77
NLRC4-201ENST00000342905 SLC4A8Q2Y0W8 1093 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 NOL9Q5SY16 702 aaKnown RBP10.24□□□□□ -0.77
NLRC4-201ENST00000342905 MFSD6Q6ZSS7 791 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 CYB5R4Q7L1T6 521 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 CHST3Q7LGC8 479 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 ERO1BQ86YB8 467 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 ZKSCAN4Q969J2 545 aaPredicted RBP10.24□□□□□ -0.77
NLRC4-201ENST00000342905 KIF12Q96FN5 646 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 TMX3Q96JJ7 454 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 PRDM10Q9NQV6 1147 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 PI4KBQ9UBF8 816 aa10.24□□□□□ -0.77
NLRC4-201ENST00000342905 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
NLRC4-201ENST00000342905 WDR19Q8NEZ3 1342 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 BAZ2BQ9UIF8 2168 aaKnown RBP10.23□□□□□ -0.77
NLRC4-201ENST00000342905 PHIPQ8WWQ0 1821 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 PHF20L1A8MW92 1017 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 PRC1O43663 620 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 HLA-DOAP06340 250 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 HSPA8P11142 646 aaKnown RBP10.23□□□□□ -0.77
NLRC4-201ENST00000342905 INPP5BP32019 993 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 MCM5P33992 734 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 GJA5P36382 358 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 RRP12Q5JTH9 1297 aaKnown RBP10.23□□□□□ -0.77
NLRC4-201ENST00000342905 C12orf60Q5U649 245 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 KRT23Q9C075 422 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 RNF41Q9H4P4 317 aaPredicted RBP10.23□□□□□ -0.77
NLRC4-201ENST00000342905 CNNM2Q9H8M5 875 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 PICK1Q9NRD5 415 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 RNF186Q9NXI6 227 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.23□□□□□ -0.77
NLRC4-201ENST00000342905 LIMCH1Q9UPQ0 1083 aa10.23□□□□□ -0.77
NLRC4-201ENST00000342905 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.23□□□□□ -0.77
NLRC4-201ENST00000342905 CTNND1O60716 968 aaKnown RBP10.22□□□□□ -0.77
NLRC4-201ENST00000342905 KDM4AO75164 1064 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 POLR3DP05423 398 aaPredicted RBP10.22□□□□□ -0.77
NLRC4-201ENST00000342905 FGRP09769 529 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 PLCD1P51178 756 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 GTF2A2P52657 109 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 LBX1P52954 281 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 PPATQ06203 517 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 PPIL2Q13356 520 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 CUL4AQ13619 759 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 ANKRD1Q15327 319 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 METTL16Q86W50 562 aaKnown RBP10.22□□□□□ -0.77
NLRC4-201ENST00000342905 AMOTL1Q8IY63 956 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 SCYL3Q8IZE3 742 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 BRF1Q92994 677 aa10.22□□□□□ -0.77
NLRC4-201ENST00000342905 TRIM34Q9BYJ4 488 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms