RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 ATP1A3P13637 1013 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 ARID5BQ14865 1188 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 PTPN21Q16825 1174 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 PIGBQ92521 554 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 RNF26Q9BY78 433 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 ARPP21Q9UBL0 812 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 SPHKAPQ2M3C7 1700 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 OPA1O60313 960 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 TICAM2Q86XR7 235 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 CCDC65Q8IXS2 484 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 REXO1Q8N1G1 1221 aaKnown RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 NPHP4O75161 1426 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 SNAP23O00161 211 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 ERCC5P28715 1186 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 CDC25BP30305 580 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 SF3B2Q13435 895 aaKnown RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 CCDC51Q96ER9 411 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 TAOK3Q9H2K8 898 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 FOXP1Q9H334 677 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 GOLGA6L10A0A0M3HER8 536 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 INF2Q27J81 1249 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 HERC4Q5GLZ8 1057 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 CCDC84Q86UT8 332 aaPredicted RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 CABP7Q86V35 215 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 JAKMIP2Q96AA8 810 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 STRBPQ96SI9 672 aaKnown RBP8.06□□□□□ -1.12
VCAN-202ENST00000342785 SELENOOQ9BVL4 669 aa8.06□□□□□ -1.12
VCAN-202ENST00000342785 KRT13P13646 458 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 RASGRF1Q13972 1273 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 IFT81Q8WYA0 676 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 EEF2KMTQ96G04 330 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 GSDMAQ96QA5 445 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 CSRNP2Q9H175 543 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 GGA1Q9UJY5 639 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 MCAMP43121 646 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 FAM98CQ17RN3 349 aaKnown RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 DNAJC21Q5F1R6 531 aaKnown RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 MICALCLQ6ZW33 695 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 DHX37Q8IY37 1157 aaKnown RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 ATRIPQ8WXE1 791 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 SYMPKQ92797 1274 aaKnown RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 NUP58Q9BVL2 599 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 AEBP2Q6ZN18 517 aaPredicted RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 LCORLQ8N3X6 602 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 CETN3O15182 167 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 RPL13P26373 211 aaKnown RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 GOLGA8FQ08AF8 430 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 GOLGA8DPQ0D2H9 430 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 CCDC174Q6PII3 467 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 SYNE4Q8N205 404 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 TBC1D5Q92609 795 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 LZTS2Q9BRK4 669 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 FAM207AQ9NSI2 230 aaPredicted RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 SMCO2A6NFE2 343 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 NBPF26B4DH59 902 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 NBPF14Q5TI25 921 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 NBPF10Q6P3W6 841 aaKnown RBP8.05□□□□□ -1.12
VCAN-202ENST00000342785 GRAMD1CQ8IYS0 662 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 NBPF15Q8N660 670 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 LMBR1Q8WVP7 490 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 NCAPD2Q15021 1401 aa8.05□□□□□ -1.12
VCAN-202ENST00000342785 FAM13AO94988 1023 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 FMNL1O95466 1100 aaPredicted RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 CHGBP05060 677 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 CRKLP46109 303 aaKnown RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 CFAP58Q5T655 872 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 OGFOD1Q8N543 542 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 GPR161Q8N6U8 529 aaKnown RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
VCAN-202ENST00000342785 KCNJ18B7U540 433 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 KLRF2D3W0D1 207 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 SLFN14P0C7P3 912 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 ADCY7P51828 1080 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 KCNJ12Q14500 433 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 NBPF11Q86T75 865 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 FCHSD1Q86WN1 690 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.04□□□□□ -1.12
VCAN-202ENST00000342785 SECISBP2LQ93073 1101 aaKnown RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.04□□□□□ -1.12
VCAN-202ENST00000342785 SPTLC3Q9NUV7 552 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 STOX1Q6ZVD7 989 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 PPP1R13BQ96KQ4 1090 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 PSMB7Q99436 277 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 USP42Q9H9J4 1324 aaKnown RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 SARM1Q6SZW1 724 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 EBAG9O00559 213 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 MMP1P03956 469 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 RABL6Q3YEC7 729 aaPredicted RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 DCAF17Q5H9S7 520 aaPredicted RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 EYA3Q99504 573 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 ANKRD62A6NC57 917 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 EFCAB8A8MWE9 144 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 H7C1D1 291 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 SLC1A4P43007 532 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 MAP2K1Q02750 393 aaPredicted RBP8.04□□□□□ -1.12
VCAN-202ENST00000342785 HLFQ16534 295 aa8.04□□□□□ -1.12
VCAN-202ENST00000342785 CERS3Q8IU89 383 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms