RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 RBPJLQ9UBG7 517 aa24.23■■□□□ 1.47
SYNE2-201ENST00000341472 TTC41PQ6P2S7 1318 aa24.23■■□□□ 1.47
SYNE2-201ENST00000341472 CYP2D7A0A087X1C5 515 aa24.22■■□□□ 1.47
SYNE2-201ENST00000341472 ANKRD45Q5TZF3 282 aa24.22■■□□□ 1.47
SYNE2-201ENST00000341472 PXYLP1Q8TE99 480 aa24.22■■□□□ 1.47
SYNE2-201ENST00000341472 GTF3C2Q8WUA4 911 aaPredicted RBP24.22■■□□□ 1.47
SYNE2-201ENST00000341472 PDE4DIPQ5VU43 2346 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 GLRX3O76003 335 aaKnown RBP24.21■■□□□ 1.47
SYNE2-201ENST00000341472 CCL5P13501 91 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 CDK8P49336 464 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 TMEM179Q6ZVK1 233 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 OTUD7AQ8TE49 926 aaPredicted RBP24.21■■□□□ 1.47
SYNE2-201ENST00000341472 APPBP2Q92624 585 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 OSBP2Q969R2 916 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 CCDC17Q96LX7 622 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 TXNRD2Q9NNW7 524 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 PHIPQ8WWQ0 1821 aa24.21■■□□□ 1.47
SYNE2-201ENST00000341472 SIPA1L1O43166 1804 aa24.2■■□□□ 1.46
SYNE2-201ENST00000341472 ELNP15502 786 aa24.2■■□□□ 1.46
SYNE2-201ENST00000341472 HDAC1Q13547 482 aaPredicted RBP24.2■■□□□ 1.46
SYNE2-201ENST00000341472 CTR9Q6PD62 1173 aa24.2■■□□□ 1.46
SYNE2-201ENST00000341472 CATSPERGQ6ZRH7 1159 aa24.2■■□□□ 1.46
SYNE2-201ENST00000341472 CCAR1Q8IX12 1150 aaKnown RBP24.2■■□□□ 1.46
SYNE2-201ENST00000341472 RNF208Q9H0X6 261 aa24.2■■□□□ 1.46
SYNE2-201ENST00000341472 GJD2Q9UKL4 321 aa24.2■■□□□ 1.46
SYNE2-201ENST00000341472 PEX10O60683 326 aa24.19■■□□□ 1.46
SYNE2-201ENST00000341472 AAMPQ13685 434 aa24.19■■□□□ 1.46
SYNE2-201ENST00000341472 Q3C1V9 767 aa24.19■■□□□ 1.46
SYNE2-201ENST00000341472 NKX2-3Q8TAU0 364 aa24.19■■□□□ 1.46
SYNE2-201ENST00000341472 GCC1Q96CN9 775 aa24.19■■□□□ 1.46
SYNE2-201ENST00000341472 A0A1W2PRG0 241 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 SMIM22K7EJ46 135 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 GJB1P08034 283 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 AKR1B1P15121 316 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 VCAM1P19320 739 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 PRPF38BQ5VTL8 546 aaKnown RBP24.18■■□□□ 1.46
SYNE2-201ENST00000341472 GIMAP6Q6P9H5 292 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 C16orf86Q6ZW13 317 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 PI4K2BQ8TCG2 481 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 PAGR1Q9BTK6 254 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 RABGAP1Q9Y3P9 1069 aa24.18■■□□□ 1.46
SYNE2-201ENST00000341472 GSG1L2A8MUP6 293 aa24.17■■□□□ 1.46
SYNE2-201ENST00000341472 INHAP05111 366 aa24.17■■□□□ 1.46
SYNE2-201ENST00000341472 MX1P20591 662 aa24.17■■□□□ 1.46
SYNE2-201ENST00000341472 ERVK-9P63128 1117 aa24.17■■□□□ 1.46
SYNE2-201ENST00000341472 ERVK-24P63145 666 aa24.17■■□□□ 1.46
SYNE2-201ENST00000341472 SBK1Q52WX2 424 aa24.17■■□□□ 1.46
SYNE2-201ENST00000341472 RPAP3Q9H6T3 665 aaPredicted RBP24.17■■□□□ 1.46
SYNE2-201ENST00000341472 CENPFP49454 3210 aa24.16■■□□□ 1.46
SYNE2-201ENST00000341472 GNAT2P19087 354 aa24.16■■□□□ 1.46
SYNE2-201ENST00000341472 MAPK4P31152 587 aa24.16■■□□□ 1.46
SYNE2-201ENST00000341472 POTEEQ6S8J3 1075 aa24.16■■□□□ 1.46
SYNE2-201ENST00000341472 SIAH1Q8IUQ4 282 aa24.16■■□□□ 1.46
SYNE2-201ENST00000341472 UNC93B1Q9H1C4 597 aa24.16■■□□□ 1.46
SYNE2-201ENST00000341472 ARPP21Q9UBL0 812 aaPredicted RBP24.16■■□□□ 1.46
SYNE2-201ENST00000341472 ZSWIM8A7E2V4 1837 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 FOCADQ5VW36 1801 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 GPAA1O43292 621 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 APPP05067 770 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 GJA8P48165 433 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 FSD1Q9BTV5 496 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 ARHGEF10LQ9HCE6 1279 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 HOXC10Q9NYD6 342 aa24.15■■□□□ 1.46
SYNE2-201ENST00000341472 TNRC18O15417 2968 aaPredicted RBP24.14■■□□□ 1.46
SYNE2-201ENST00000341472 MINDY4BA8MYZ0 360 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 PATL2C9JE40 543 aaKnown RBP24.14■■□□□ 1.45
SYNE2-201ENST00000341472 CCNA1P78396 465 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 ICA1Q05084 483 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 COG2Q14746 738 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 CDK5RAP2Q96SN8 1893 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 NUDT12Q9BQG2 462 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 RWDD1Q9H446 243 aaPredicted RBP24.14■■□□□ 1.45
SYNE2-201ENST00000341472 SH2D4AQ9H788 454 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 TMX2Q9Y320 296 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 PTPRFP10586 1907 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 MYH1P12882 1939 aa24.14■■□□□ 1.45
SYNE2-201ENST00000341472 M0R2C6 588 aa24.13■■□□□ 1.45
SYNE2-201ENST00000341472 CYP2B6P20813 491 aa24.13■■□□□ 1.45
SYNE2-201ENST00000341472 PLEKHH3Q7Z736 793 aa24.13■■□□□ 1.45
SYNE2-201ENST00000341472 PORCNQ9H237 461 aa24.13■■□□□ 1.45
SYNE2-201ENST00000341472 KANSL2Q9H9L4 492 aa24.13■■□□□ 1.45
SYNE2-201ENST00000341472 MKNK2Q9HBH9 465 aa24.13■■□□□ 1.45
SYNE2-201ENST00000341472 CWC22Q9HCG8 908 aaKnown RBP24.13■■□□□ 1.45
SYNE2-201ENST00000341472 CNMDO75829 334 aa24.12■■□□□ 1.45
SYNE2-201ENST00000341472 LBX2Q6XYB7 198 aa24.12■■□□□ 1.45
SYNE2-201ENST00000341472 U2AF1L4Q8WU68 220 aaKnown RBP24.12■■□□□ 1.45
SYNE2-201ENST00000341472 SOCS4Q8WXH5 440 aa24.12■■□□□ 1.45
SYNE2-201ENST00000341472 LPAR1Q92633 364 aa24.12■■□□□ 1.45
SYNE2-201ENST00000341472 STAP2Q9UGK3 403 aa24.12■■□□□ 1.45
SYNE2-201ENST00000341472 SGPL1O95470 568 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 HMGCRP04035 888 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 XRCC5P13010 732 aaKnown RBP24.11■■□□□ 1.45
SYNE2-201ENST00000341472 TDO2P48775 406 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 ATP2B2Q01814 1243 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 GPR142Q7Z601 462 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 CLEC10AQ8IUN9 316 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 STK11IPQ8N1F8 1099 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 SHISA4Q96DD7 197 aa24.11■■□□□ 1.45
SYNE2-201ENST00000341472 SEC62Q99442 399 aaKnown RBP24.11■■□□□ 1.45
SYNE2-201ENST00000341472 NACAP1Q9BZK3 213 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms