RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SDSP20132 328 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 FLOT2Q14254 428 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 RAPH1Q70E73 1250 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 MED4Q9NPJ6 270 aa14.14□□□□□ -0.15
USP47-202ENST00000339865 SUN1O94901 812 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 RXRAP19793 462 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 ECE1P42892 770 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 TMTC3Q6ZXV5 915 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 RPGRIP1Q96KN7 1286 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 PDE4DQ08499 809 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 LONRF2Q1L5Z9 754 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 PKD2L1Q9P0L9 805 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 POLKQ9UBT6 870 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 H3BRJ5 948 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 HLA-DPA1P20036 260 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 TRIM59Q8IWR1 403 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 GOLGA5Q8TBA6 731 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 SPC25Q9HBM1 224 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 CALUO43852 315 aaPredicted RBP14.13□□□□□ -0.15
USP47-202ENST00000339865 CSGALNACT2Q8N6G5 542 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 ATP5J2-PTCD1G3V325 749 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 NEK2P51955 445 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 MCMDC2Q4G0Z9 681 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 NUP58Q9BVL2 599 aa14.13□□□□□ -0.15
USP47-202ENST00000339865 PPP1R42Q7Z4L9 355 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 ADAT2Q7Z6V5 191 aaKnown RBP14.12□□□□□ -0.15
USP47-202ENST00000339865 SPDYE2BA6NHP3 402 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 GOLGA8KD6RF30 607 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 MAP3K7O43318 606 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 SPDYE6P0CI01 402 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 GNA11P29992 359 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 TAF11Q15544 211 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 SLC24A3Q9HC58 644 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 PTPRCP08575 1304 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 GSTO1P78417 241 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 ZCRB1Q8TBF4 217 aaKnown RBP14.12□□□□□ -0.15
USP47-202ENST00000339865 JDP2Q8WYK2 163 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 HNRNPCP07910 306 aaKnown RBP eCLIP14.12□□□□□ -0.15
USP47-202ENST00000339865 TRIM27P14373 513 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 JARID2Q92833 1246 aaPredicted RBP14.12□□□□□ -0.15
USP47-202ENST00000339865 ACSBG1Q96GR2 724 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 CCDC68Q9H2F9 335 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 SAR1BQ9Y6B6 198 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 hCG_2014768A0A024R1R8 64 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 BCRP11274 1271 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 MRPS15P82914 257 aaKnown RBP14.12□□□□□ -0.15
USP47-202ENST00000339865 KRT81Q14533 505 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 ATP6V0A1Q93050 837 aa14.12□□□□□ -0.15
USP47-202ENST00000339865 E9PMD0 336 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 FLOT1O75955 427 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 IQSEC3Q9UPP2 1182 aaPredicted RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 SYCE1LA8MT33 242 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 SLMAPQ14BN4 828 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 PTPROQ16827 1216 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 FAM47CQ5HY64 1035 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 EFHD1Q9BUP0 239 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 B4DLN1 442 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 NVLO15381 856 aaKnown RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 MCF2P10911 925 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 ADCY8P40145 1251 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 MRPL12P52815 198 aaKnown RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 BRD3Q15059 726 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 KCTD16Q68DU8 428 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 IFIH1Q9BYX4 1025 aaKnown RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 H0YC42 278 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 ITKQ08881 620 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 APOBRQ0VD83 1088 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 ARHGAP44Q17R89 818 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 NBPF10Q6P3W6 841 aaKnown RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 AMOTL2Q9Y2J4 779 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 KRIT1O00522 736 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 GSTA4O15217 222 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 EVI5O60447 810 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 RANBP1P43487 201 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 IFNAR2P48551 515 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 UHMK1Q8TAS1 419 aaKnown RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 PYGLP06737 847 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 ZNF174Q15697 407 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 ZKSCAN8Q15776 578 aaPredicted RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 TYW1BQ6NUM6 668 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 SLF1Q9BQI6 1058 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 RIC8AQ9NPQ8 531 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 SUCLA2Q9P2R7 463 aaPredicted RBP14.11□□□□□ -0.15
USP47-202ENST00000339865 CAPN11Q9UMQ6 739 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
USP47-202ENST00000339865 ASPHQ12797 758 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 MTX1Q13505 466 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 LETM2Q2VYF4 491 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 GOLGA8QA0A0J9YX86 632 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 GOLGA8OA6NCC3 632 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 GOLGA8NF8WBI6 632 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 KCNK3O14649 394 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 ARHGDIAP52565 204 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.1□□□□□ -0.15
USP47-202ENST00000339865 TBC1D7Q9P0N9 293 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 IMPACTQ9P2X3 320 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 FANCCQ00597 558 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 STRN3Q13033 797 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 ZBTB3Q9H5J0 574 aa14.1□□□□□ -0.15
USP47-202ENST00000339865 AMFRQ9UKV5 643 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms