RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CDC25AP30304 524 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 STX17P56962 302 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 RIC3Q7Z5B4 369 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 OSBP2Q969R2 916 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 RPGRIP1Q96KN7 1286 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 CTAGE1Q96RT6 745 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 CHP1Q99653 195 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 OVOS2A0A0G2JMS6 1433 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 GOLGA8KD6RF30 607 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 PDE2AO00408 941 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-201ENST00000339754 ELF1P32519 619 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 TOB1P50616 345 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-201ENST00000339754 NEDD9Q14511 834 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 PREPLQ4J6C6 727 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-201ENST00000339754 OTUD6BQ8N6M0 293 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 GIMAP7Q8NHV1 300 aa10.6□□□□□ -0.71
NECAP1-201ENST00000339754 EPN1Q9Y6I3 576 aaPredicted RBP10.6□□□□□ -0.71
NECAP1-201ENST00000339754 LRRC10BA6NIK2 292 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 SEMA3EO15041 775 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 FGAP02671 866 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 EPB41P11171 864 aaKnown RBP10.59□□□□□ -0.71
NECAP1-201ENST00000339754 RABL6Q3YEC7 729 aaPredicted RBP10.59□□□□□ -0.71
NECAP1-201ENST00000339754 FILIP1LQ4L180 1135 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 ANKRD18AQ8IVF6 992 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 IP6K1Q92551 441 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 FAM184BQ9ULE4 1060 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 WDR17Q8IZU2 1322 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 NDUFAB1O14561 156 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 NDUFA10O95299 355 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 IMMTQ16891 758 aaKnown RBP10.59□□□□□ -0.71
NECAP1-201ENST00000339754 WLSQ5T9L3 541 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 UBE3BQ7Z3V4 1068 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 KRT28Q7Z3Y7 464 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 YTHDF3Q7Z739 585 aaKnown RBP10.59□□□□□ -0.71
NECAP1-201ENST00000339754 PHKBQ93100 1093 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 ARL8AQ96BM9 186 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 CAPZA3Q96KX2 299 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 PAGR1Q9BTK6 254 aa10.59□□□□□ -0.71
NECAP1-201ENST00000339754 CPDO75976 1380 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 H0YHG0 523 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 RNMTO43148 476 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 RASSF9O75901 435 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 TIMM10P62072 90 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 SF3B2Q13435 895 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 TTMPQ5BVD1 217 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 KANK3Q6NY19 840 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 USP49Q70CQ1 688 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 SPATS2Q86XZ4 545 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 KCNH5Q8NCM2 988 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 NCOA7Q8NI08 942 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 NKX2-3Q8TAU0 364 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 HAUS4Q9H6D7 363 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 LTN1O94822 1766 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 SYNRGQ9UMZ2 1314 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 A6NNZ2 444 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 SH2B2O14492 632 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 GCP02774 474 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 SMTNP53814 917 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 CKAP4Q07065 602 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 NEXNQ0ZGT2 675 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 PDCLQ13371 301 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 NTRK3Q16288 839 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 SND1Q7KZF4 910 aaKnown RBP eCLIP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 DDX17Q92841 729 aaKnown RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 FAXDC2Q96IV6 333 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 NEUROD6Q96NK8 337 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 MYD88Q99836 296 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 HINFPQ9BQA5 517 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 METTL22Q9BUU2 404 aaPredicted RBP10.58□□□□□ -0.72
NECAP1-201ENST00000339754 KLC4Q9NSK0 619 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 TAOK2Q9UL54 1235 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 TFR2Q9UP52 801 aa10.58□□□□□ -0.72
NECAP1-201ENST00000339754 NFAT5O94916 1531 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 UBE2Q2LH0YL09 131 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 ZNF185O15231 689 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 KIAA0754O94854 1291 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 A1BGP04217 495 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 KRT9P35527 623 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 CCT6AP40227 531 aaKnown RBP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 HERVK_113P62684 666 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 KRT31Q15323 416 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 JAKMIP2Q96AA8 810 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 LIMA1Q9UHB6 759 aaKnown RBP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 MST1RQ04912 1400 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 LMO7Q8WWI1 1683 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 C1orf167Q5SNV9 1468 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 OPA1O60313 960 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 ATF3P18847 181 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 RXRAP19793 462 aa10.57□□□□□ -0.72
NECAP1-201ENST00000339754 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 NAP1L1P55209 391 aaKnown RBP10.57□□□□□ -0.72
NECAP1-201ENST00000339754 ACTN3Q08043 901 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms