RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 ALG1LQ6GMV1 187 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 SV2BQ7L1I2 683 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 CREG2Q8IUH2 290 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 RETREG2Q8NC44 543 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 GAL3ST3Q96A11 431 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 TRHRP34981 398 aaPredicted RBP5.16□□□□□ -1.58
XRCC4-202ENST00000338635 PIWIL2Q8TC59 973 aaKnown RBP5.16□□□□□ -1.58
XRCC4-202ENST00000338635 IRF2BPLQ9H1B7 796 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 TMPRSS5Q9H3S3 457 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 C12orf49Q9H741 205 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 FAM8A1Q9UBU6 413 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 SPG7Q9UQ90 795 aa5.16□□□□□ -1.58
XRCC4-202ENST00000338635 GFRA2O00451 464 aa5.15□□□□□ -1.59
XRCC4-202ENST00000338635 USP17L7P0C7H9 530 aa5.15□□□□□ -1.59
XRCC4-202ENST00000338635 LINC00310P59036 64 aa5.15□□□□□ -1.59
XRCC4-202ENST00000338635 TTBK2Q6IQ55 1244 aa5.15□□□□□ -1.59
XRCC4-202ENST00000338635 GGNQ86UU5 652 aa5.15□□□□□ -1.59
XRCC4-202ENST00000338635 DUSP15Q9H1R2 295 aaPredicted RBP5.15□□□□□ -1.59
XRCC4-202ENST00000338635 FOXD2O60548 495 aaPredicted RBP5.14□□□□□ -1.59
XRCC4-202ENST00000338635 TPP2P29144 1249 aaPredicted RBP5.14□□□□□ -1.59
XRCC4-202ENST00000338635 FMR1Q06787 632 aaKnown RBP eCLIP5.14□□□□□ -1.59
XRCC4-202ENST00000338635 DPH2Q9BQC3 489 aaPredicted RBP5.14□□□□□ -1.59
XRCC4-202ENST00000338635 RNF32Q9H0A6 362 aa5.14□□□□□ -1.59
XRCC4-202ENST00000338635 TJP2Q9UDY2 1190 aa5.14□□□□□ -1.59
XRCC4-202ENST00000338635 GNEQ9Y223 722 aaKnown RBP5.14□□□□□ -1.59
XRCC4-202ENST00000338635 SRFP11831 508 aa5.13□□□□□ -1.59
XRCC4-202ENST00000338635 ZSCAN29Q8IWY8 852 aaPredicted RBP5.13□□□□□ -1.59
XRCC4-202ENST00000338635 MRPL41Q8IXM3 137 aaKnown RBP5.13□□□□□ -1.59
XRCC4-202ENST00000338635 Q96M66 194 aa5.13□□□□□ -1.59
XRCC4-202ENST00000338635 C19orf44Q9H6X5 657 aa5.13□□□□□ -1.59
XRCC4-202ENST00000338635 SP110Q9HB58 689 aa5.13□□□□□ -1.59
XRCC4-202ENST00000338635 TTF2Q9UNY4 1162 aaKnown RBP5.13□□□□□ -1.59
XRCC4-202ENST00000338635 PCDHB5Q9Y5E4 795 aa5.13□□□□□ -1.59
XRCC4-202ENST00000338635 TACC3Q9Y6A5 838 aa5.13□□□□□ -1.59
XRCC4-202ENST00000338635 PGRP06401 933 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 LMNB1P20700 586 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 ETV3P41162 512 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 ATP2B2Q01814 1243 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 SEPT6Q14141 434 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 GAB4Q2WGN9 574 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 SLC6A19Q695T7 634 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 TMEM87BQ96K49 555 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 TRIT1Q9H3H1 467 aaKnown RBP5.12□□□□□ -1.59
XRCC4-202ENST00000338635 CEP131Q9UPN4 1083 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 PDZD8Q8NEN9 1154 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 ARID3AQ99856 593 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 MCOLN1Q9GZU1 580 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 PARD6AQ9NPB6 346 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 GPATCH2Q9NW75 528 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 DUSP13Q9UII6 198 aa5.12□□□□□ -1.59
XRCC4-202ENST00000338635 ZGLP1P0C6A0 271 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 KRTAP10-2P60368 255 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 RPS26P62854 115 aaKnown RBP5.11□□□□□ -1.59
XRCC4-202ENST00000338635 DLG4P78352 724 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 EGR3Q06889 387 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 TMEM132EQ6IEE7 984 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 ZNF605Q86T29 641 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 IRF2BP1Q8IU81 584 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 MCATQ8IVS2 390 aaKnown RBP5.11□□□□□ -1.59
XRCC4-202ENST00000338635 LILRA2Q8N149 483 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 OXR1Q8N573 874 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 DNAJB8Q8NHS0 232 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 BAHD1Q8TBE0 780 aaPredicted RBP5.11□□□□□ -1.59
XRCC4-202ENST00000338635 SLC6A17Q9H1V8 727 aa5.11□□□□□ -1.59
XRCC4-202ENST00000338635 MYOCOSA0A1B0GUC4 107 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 SYN1P17600 705 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 BMP7P18075 431 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 CCDC85BQ15834 202 aaPredicted RBP5.1□□□□□ -1.59
XRCC4-202ENST00000338635 TIGD5Q53EQ6 642 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 ASB16Q96NS5 453 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 GPR62Q9BZJ7 368 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 ZCCHC4Q9H5U6 513 aa5.1□□□□□ -1.59
XRCC4-202ENST00000338635 FITM1A5D6W6 292 aa5.09□□□□□ -1.59
XRCC4-202ENST00000338635 PEX10O60683 326 aa5.09□□□□□ -1.59
XRCC4-202ENST00000338635 PDE4BQ07343 736 aa5.09□□□□□ -1.59
XRCC4-202ENST00000338635 C14orf37Q86TY3 774 aa5.09□□□□□ -1.59
XRCC4-202ENST00000338635 TSPYL5Q86VY4 417 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-202ENST00000338635 DHX38Q92620 1227 aaKnown RBP5.09□□□□□ -1.59
XRCC4-202ENST00000338635 FRMD6Q96NE9 622 aa5.09□□□□□ -1.59
XRCC4-202ENST00000338635 ZNF552Q9H707 407 aaPredicted RBP5.09□□□□□ -1.59
XRCC4-202ENST00000338635 CWC22Q9HCG8 908 aaKnown RBP5.09□□□□□ -1.59
XRCC4-202ENST00000338635 KCNH3Q9ULD8 1083 aa5.09□□□□□ -1.59
XRCC4-202ENST00000338635 NR0B2Q15466 257 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 MAP3K11Q16584 847 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 AGMOQ6ZNB7 445 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 PPP1R13LQ8WUF5 828 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 SYTL4Q96C24 671 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 ACSF2Q96CM8 615 aaPredicted RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 INTS4Q96HW7 963 aaKnown RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 CNOT6Q9ULM6 557 aaKnown RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 YBX2Q9Y2T7 364 aaKnown RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 PCDHA11Q9Y5I1 949 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 SEMA7AO75326 666 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 BRD1O95696 1058 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 LDHBP07195 334 aaKnown RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 EIF4BP23588 611 aaKnown RBP5.08□□□□□ -1.6
XRCC4-202ENST00000338635 LTKP29376 864 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 PDE6BP35913 854 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 TSNAXIP1Q2TAA8 658 aa5.08□□□□□ -1.6
XRCC4-202ENST00000338635 SPPL2CQ8IUH8 684 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms