RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.17■□□□□ 0.5
SEC13-201ENST00000337354 MYH1P12882 1939 aa18.16■□□□□ 0.5
SEC13-201ENST00000337354 C19orf81C9J6K1 198 aa18.16■□□□□ 0.5
SEC13-201ENST00000337354 GJA5P36382 358 aa18.16■□□□□ 0.5
SEC13-201ENST00000337354 SPP2Q13103 211 aa18.16■□□□□ 0.5
SEC13-201ENST00000337354 CCDC178Q5BJE1 867 aa18.16■□□□□ 0.5
SEC13-201ENST00000337354 FAM47AQ5JRC9 791 aa18.16■□□□□ 0.5
SEC13-201ENST00000337354 RALYLQ86SE5 291 aaKnown RBP18.16■□□□□ 0.5
SEC13-201ENST00000337354 PLIN4Q96Q06 1357 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 LAMB1P07942 1786 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 IGKV6D-41A0A0C4DH26 115 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 USP17L10C9JJH3 530 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 BACE1P56817 501 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 ICA1Q05084 483 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 MKRN3Q13064 507 aaKnown RBP18.15■□□□□ 0.5
SEC13-201ENST00000337354 SHROOM1Q2M3G4 852 aaPredicted RBP18.15■□□□□ 0.5
SEC13-201ENST00000337354 IQCA1Q86XH1 822 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 TTC14Q96N46 770 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 SH2D4AQ9H788 454 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 MTMR4Q9NYA4 1195 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 ZSWIM5Q9P217 1185 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 NYAP2Q9P242 653 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 SYNPO2Q9UMS6 1093 aa18.15■□□□□ 0.5
SEC13-201ENST00000337354 NEDD4P46934 1319 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 SIPA1L1O43166 1804 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 TESPA1A2RU30 521 aaPredicted RBP18.14■□□□□ 0.49
SEC13-201ENST00000337354 FOXN1O15353 648 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 KDM4AO75164 1064 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 CETPP11597 493 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 USP14P54578 494 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 KIF23Q02241 960 aaPredicted RBP18.14■□□□□ 0.49
SEC13-201ENST00000337354 SREBF2Q12772 1141 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 SH3D19Q5HYK7 790 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 FASTKD5Q7L8L6 764 aaKnown RBP18.14■□□□□ 0.49
SEC13-201ENST00000337354 MKL1Q969V6 931 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 MS4A4AQ96JQ5 239 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 ZIC5Q96T25 663 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 KIAA1683Q9H0B3 1180 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 WBP1LQ9NX94 342 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.14■□□□□ 0.49
SEC13-201ENST00000337354 TMX2Q9Y320 296 aa18.14■□□□□ 0.49
SEC13-201ENST00000337354 TRIM75PA6NK02 468 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 B4E1Z4 1266 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 TTLL1O95922 423 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 EEF2P13639 858 aaKnown RBP18.13■□□□□ 0.49
SEC13-201ENST00000337354 TM4SF4P48230 202 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 NOVP48745 357 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 CCDC84Q86UT8 332 aaPredicted RBP18.13■□□□□ 0.49
SEC13-201ENST00000337354 SIAH1Q8IUQ4 282 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 CEP95Q96GE4 821 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 MTA3Q9BTC8 594 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 IL17RBQ9NRM6 502 aa18.13■□□□□ 0.49
SEC13-201ENST00000337354 A0A0G2JLL6 359 aaPredicted RBP18.12■□□□□ 0.49
SEC13-201ENST00000337354 SEC24BO95487 1268 aa18.12■□□□□ 0.49
SEC13-201ENST00000337354 HMGB1P09429 215 aaKnown RBP18.12■□□□□ 0.49
SEC13-201ENST00000337354 STOX1Q6ZVD7 989 aa18.12■□□□□ 0.49
SEC13-201ENST00000337354 PRRT2Q7Z6L0 340 aaPredicted RBP18.12■□□□□ 0.49
SEC13-201ENST00000337354 DGKHQ86XP1 1220 aa18.12■□□□□ 0.49
SEC13-201ENST00000337354 RASEFQ8IZ41 740 aa18.12■□□□□ 0.49
SEC13-201ENST00000337354 NEK1Q96PY6 1258 aa18.12■□□□□ 0.49
SEC13-201ENST00000337354 TAF6LQ9Y6J9 622 aa18.12■□□□□ 0.49
SEC13-201ENST00000337354 BAZ2AQ9UIF9 1905 aaKnown RBP18.12■□□□□ 0.49
SEC13-201ENST00000337354 PCNTO95613 3336 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 PSMA5P28066 241 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 USP17L2Q6R6M4 530 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 PROCA1Q8NCQ7 364 aaPredicted RBP18.11■□□□□ 0.49
SEC13-201ENST00000337354 ACER1Q8TDN7 264 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 ZSCAN10Q96SZ4 725 aaPredicted RBP18.11■□□□□ 0.49
SEC13-201ENST00000337354 FEZ1Q99689 392 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 UBAC1Q9BSL1 405 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 TMOD4Q9NZQ9 345 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 CLIP2Q9UDT6 1046 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 SNX14Q9Y5W7 946 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 DOCK1Q14185 1865 aa18.11■□□□□ 0.49
SEC13-201ENST00000337354 CCL15-CCL14A0A0B4J2E2 113 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 A0A1W2PRG0 241 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 MCM5P33992 734 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
SEC13-201ENST00000337354 ANAPC15P60006 121 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 ATP2B2Q01814 1243 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 MTMR2Q13614 643 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 SART3Q15020 963 aaKnown RBP18.1■□□□□ 0.49
SEC13-201ENST00000337354 CCL15Q16663 113 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 ANKS1AQ92625 1134 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 C12orf42Q96LP6 360 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
SEC13-201ENST00000337354 STX8Q9UNK0 236 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 ATAD5Q96QE3 1844 aa18.1■□□□□ 0.49
SEC13-201ENST00000337354 ERICH2A1L162 156 aa18.09■□□□□ 0.49
SEC13-201ENST00000337354 MB21D2Q8IYB1 491 aaPredicted RBP18.09■□□□□ 0.49
SEC13-201ENST00000337354 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
SEC13-201ENST00000337354 LPAR1Q92633 364 aa18.09■□□□□ 0.49
SEC13-201ENST00000337354 GOPCQ9HD26 462 aa18.09■□□□□ 0.49
SEC13-201ENST00000337354 ZCCHC17Q9NP64 241 aaKnown RBP18.09■□□□□ 0.49
SEC13-201ENST00000337354 EMILIN3Q9NT22 766 aa18.09■□□□□ 0.49
SEC13-201ENST00000337354 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
SEC13-201ENST00000337354 NMT2O60551 498 aa18.08■□□□□ 0.49
SEC13-201ENST00000337354 ALDH1A1P00352 501 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms