RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 HDAC6Q9UBN7 1215 aa5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 OPHN1O60890 802 aa5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 CCT5P48643 541 aa5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 NAPGQ99747 312 aaPredicted RBP5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 SEPT3Q9UH03 358 aa5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 IDH3BO43837 385 aa5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 PNISRQ8TF01 805 aaKnown RBP5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 HSPA1LP34931 641 aa5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 ZC3H6P61129 1189 aaKnown RBP5.9□□□□□ -1.46
TNRC6B-202ENST00000335727 CRELD2Q6UXH1 353 aaPredicted RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CYP46A1Q9Y6A2 500 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CTAGE3PQ8IX95 158 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 MMADHCQ9H3L0 296 aaPredicted RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 PFDN4Q9NQP4 134 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 ACADSP16219 412 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 SPAG1Q07617 926 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 WASHC4Q2M389 1173 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CCDC197Q8NCU1 140 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CCDC138Q96M89 665 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 MAP3K20Q9NYL2 800 aaKnown RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 ZBED4O75132 1171 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 HNRNPMP52272 730 aaKnown RBP eCLIP5.9□□□□□ -1.471e-6■■■■□ 21.1
TNRC6B-202ENST00000335727 SRCIN1Q9C0H9 1055 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 NKIRAS1Q9NYS0 192 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 E7EVH7 732 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CLEC17AQ6ZS10 378 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 GABPB2Q8TAK5 448 aaPredicted RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CTTNBP2Q8WZ74 1663 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 LCA5LO95447 670 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 APOEP02649 317 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 ATN1P54259 1190 aaPredicted RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 ITGB3BPQ13352 177 aaPredicted RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 TIMMDC1Q9NPL8 285 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 CUX1P39880 1505 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 HGSO14964 777 aaPredicted RBP5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 PPP2R3CQ969Q6 453 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 PLVAPQ9BX97 442 aa5.9□□□□□ -1.47
TNRC6B-202ENST00000335727 TRPA1O75762 1119 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 SRGAP1Q7Z6B7 1085 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 RSPH1Q8WYR4 309 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 KRT23Q9C075 422 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 ZSCAN16Q9H4T2 348 aaPredicted RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 ERCC6LQ2NKX8 1250 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 ZFATQ9P243 1243 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 FAM200BP0CF97 657 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 CCDC15Q0P6D6 951 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 SPIDRQ14159 915 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 RASA3Q14644 834 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 DHX58Q96C10 678 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PPIP5K2O43314 1243 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 COBLO75128 1261 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 CAPN1P07384 714 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 EIF3BP55884 814 aaKnown RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 FSD1Q9BTV5 496 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 ATXN10Q9UBB4 475 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 CROTQ9UKG9 612 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 ERBB4Q15303 1308 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 RASGRF2O14827 1237 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 POSTNQ15063 836 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PREPLQ4J6C6 727 aaPredicted RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PRR23CQ6ZRP0 262 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 FGFR1OP2Q9NVK5 253 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 FSBPO95073 299 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 KIF11P52732 1056 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 COMMD3-BMI1R4GMX3 469 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 OATP04181 439 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 MYBL2P10244 700 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 CEP85Q6P2H3 762 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 CCDC69A6NI79 296 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 EXOC5O00471 708 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PHACTR2O75167 634 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 KANK3Q6NY19 840 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 EVI5LQ96CN4 794 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 FOSP01100 380 aaPredicted RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 TBL3Q12788 808 aaKnown RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 EMBQ6PCB8 327 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 SERPINB10P48595 397 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 SYCP3Q8IZU3 236 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 STOML2Q9UJZ1 356 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PDLIM1O00151 329 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PPP6R3Q5H9R7 873 aaPredicted RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 KIAA2013Q8IYS2 634 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 SESN1Q9Y6P5 492 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 HDDC2Q7Z4H3 204 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 UBL4BQ8N7F7 174 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 DHX36Q9H2U1 1008 aaKnown RBP5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 PCDH18Q9HCL0 1135 aa5.89□□□□□ -1.47
TNRC6B-202ENST00000335727 GOLGA8QA0A0J9YX86 632 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 GOLGA8OA6NCC3 632 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 GOLGA8NF8WBI6 632 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 GNGT1P63211 74 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 CCDC93Q567U6 631 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 C11orf74Q86VG3 221 aa5.88□□□□□ -1.47
TNRC6B-202ENST00000335727 DMAP1Q9NPF5 467 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms