RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.75□□□□□ -1.17
USP16-201ENST00000334352 MROH8Q9H579 483 aa7.75□□□□□ -1.17
USP16-201ENST00000334352 ABCF2Q9UG63 623 aa7.75□□□□□ -1.17
USP16-201ENST00000334352 TMX2Q9Y320 296 aa7.75□□□□□ -1.17
USP16-201ENST00000334352 FMNL1O95466 1100 aaPredicted RBP7.74□□□□□ -1.17
USP16-201ENST00000334352 SLC25A27O95847 323 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 INHAP05111 366 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 FGRP09769 529 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 PTPREP23469 700 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 ERVK-9P63128 1117 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 ERVK-24P63145 666 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 C12orf60Q5U649 245 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 GADL1Q6ZQY3 521 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 PLEKHH3Q7Z736 793 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 GABRQQ9UN88 632 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 TNNQ9UQP3 1299 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 COL11A1P12107 1806 aaPredicted RBP7.74□□□□□ -1.17
USP16-201ENST00000334352 WDR46O15213 610 aaKnown RBP7.74□□□□□ -1.17
USP16-201ENST00000334352 FLT3LGP49771 235 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 MAP2K5Q13163 448 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 POTEEQ6S8J3 1075 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 U2AF1L4Q8WU68 220 aaKnown RBP7.74□□□□□ -1.17
USP16-201ENST00000334352 NUDT12Q9BQG2 462 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 HOXC10Q9NYD6 342 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 NYAP2Q9P242 653 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 ARPP21Q9UBL0 812 aaPredicted RBP7.74□□□□□ -1.17
USP16-201ENST00000334352 NR2E3Q9Y5X4 410 aa7.74□□□□□ -1.17
USP16-201ENST00000334352 TNPO2O14787 897 aaKnown RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 JAG1P78504 1218 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 SPP2Q13103 211 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 ALX1Q15699 326 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 ITPRIPQ8IWB1 547 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 TGFBRAP1Q8WUH2 860 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 DCP1AQ9NPI6 582 aaPredicted RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 STAP2Q9UGK3 403 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 ANAPC4Q9UJX5 808 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 PNMA2Q9UL42 364 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 ABCB5Q2M3G0 1257 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 CERKLQ49MI3 558 aaPredicted RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 DIEXFQ68CQ4 756 aaKnown RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 MAGEB6Q8N7X4 407 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 REPS2Q8NFH8 660 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 AATFQ9NY61 560 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP16-201ENST00000334352 APBB1O00213 710 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 CYP2C8P10632 490 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 PCP11498 1178 aaKnown RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 DSG3P32926 999 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 LRIT3Q3SXY7 679 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 LHX8Q68G74 356 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 TBC1D9Q6ZT07 1266 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 GMCL1P1Q8NEA9 526 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 P2RX7Q99572 595 aaKnown RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 HMX1Q9NP08 348 aaPredicted RBP7.73□□□□□ -1.17
USP16-201ENST00000334352 CABP5Q9NP86 173 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 PAG1Q9NWQ8 432 aa7.73□□□□□ -1.17
USP16-201ENST00000334352 MYH4Q9Y623 1939 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 TMEM265A0A087WTH1 108 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 FXR1P51114 621 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP16-201ENST00000334352 TKFCQ3LXA3 575 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 PI16Q6UXB8 463 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 NECAB2Q7Z6G3 386 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 AACSQ86V21 672 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 RIOX2Q8IUF8 465 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 MIER1Q8N108 512 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 UNC93B1Q9H1C4 597 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 TLR7Q9NYK1 1049 aaKnown RBP7.72□□□□□ -1.17
USP16-201ENST00000334352 RCAN3Q9UKA8 241 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 TNRC18O15417 2968 aaPredicted RBP7.72□□□□□ -1.17
USP16-201ENST00000334352 MAMDC4Q6UXC1 1216 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 GPR142Q7Z601 462 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 SIAH1Q8IUQ4 282 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 ZSCAN29Q8IWY8 852 aaPredicted RBP7.72□□□□□ -1.17
USP16-201ENST00000334352 GDF15Q99988 308 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 SLC5A4Q9NY91 659 aa7.72□□□□□ -1.17
USP16-201ENST00000334352 SYNGAP1Q96PV0 1343 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 ZNFX1Q9P2E3 1918 aaKnown RBP7.71□□□□□ -1.17
USP16-201ENST00000334352 HMGCS2P54868 508 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 IRX3P78415 501 aaPredicted RBP7.71□□□□□ -1.17
USP16-201ENST00000334352 HNRNPUQ00839 825 aaKnown RBP eCLIP7.71□□□□□ -1.17
USP16-201ENST00000334352 PICALMQ13492 652 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 HDAC1Q13547 482 aaPredicted RBP7.71□□□□□ -1.17
USP16-201ENST00000334352 MTMR2Q13614 643 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 COG2Q14746 738 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 SLC4A8Q2Y0W8 1093 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 KBTBD3Q8NAB2 608 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 FRAT1Q92837 279 aaPredicted RBP7.71□□□□□ -1.17
USP16-201ENST00000334352 LRRCC1Q9C099 1032 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 C11orf49Q9H6J7 331 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 VCPKMTQ9H867 229 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 KANSL2Q9H9L4 492 aa7.71□□□□□ -1.17
USP16-201ENST00000334352 ZNF532Q9HCE3 1301 aa7.71□□□□□ -1.18
USP16-201ENST00000334352 SPDYE16A6NNV3 312 aaPredicted RBP7.71□□□□□ -1.18
USP16-201ENST00000334352 DNM1LO00429 736 aa7.71□□□□□ -1.18
USP16-201ENST00000334352 CYBAP13498 195 aa7.71□□□□□ -1.18
USP16-201ENST00000334352 CST5P28325 142 aaPredicted RBP7.71□□□□□ -1.18
USP16-201ENST00000334352 DYNLL1P63167 89 aaKnown RBP7.71□□□□□ -1.18
USP16-201ENST00000334352 OS9Q13438 667 aaPredicted RBP7.71□□□□□ -1.18
USP16-201ENST00000334352 CRACR2BQ8N4Y2 399 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms