RNA–Protein interactions for RNA: ENST00000327726.10

CFD-201, Transcript of complement factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CFD, Length 1,201 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-201ENST00000327726 USP17L11C9JVI0 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 USP17L18D6R9N7 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 USP17L22D6RA61 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 USP17L17D6RBQ6 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 USP17L19D6RCP7 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 USP17L20D6RJB6 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 USP17L24Q0WX57 530 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 HDAC1Q13547 482 aaPredicted RBP25.12■■□□□ 1.61
CFD-201ENST00000327726 AAMPQ13685 434 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 CCAR1Q8IX12 1150 aaKnown RBP25.12■■□□□ 1.61
CFD-201ENST00000327726 SWAP70Q9UH65 585 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 GJD2Q9UKL4 321 aa25.12■■□□□ 1.61
CFD-201ENST00000327726 MBD4O95243 580 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 SGPL1O95470 568 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 MAPK4P31152 587 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 UBE3CQ15386 1083 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 AMOTL1Q8IY63 956 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 DDRGK1Q96HY6 314 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 GPATCH3Q96I76 525 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 RBPJLQ9UBG7 517 aa25.11■■□□□ 1.61
CFD-201ENST00000327726 MPHOSPH10O00566 681 aaKnown RBP25.1■■□□□ 1.61
CFD-201ENST00000327726 HMGCRP04035 888 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 ERVK-9P63128 1117 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 ERVK-24P63145 666 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 SOCS4Q8WXH5 440 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 PAGR1Q9BTK6 254 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 TXNRD2Q9NNW7 524 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 ECHDC1Q9NTX5 307 aa25.1■■□□□ 1.61
CFD-201ENST00000327726 NUDT12Q9BQG2 462 aa25.09■■□□□ 1.61
CFD-201ENST00000327726 HTATIP2Q9BUP3 242 aa25.09■■□□□ 1.61
CFD-201ENST00000327726 TFRCP02786 760 aaKnown RBP25.08■■□□□ 1.61
CFD-201ENST00000327726 VCAM1P19320 739 aa25.08■■□□□ 1.61
CFD-201ENST00000327726 SEPT2Q15019 361 aa25.08■■□□□ 1.61
CFD-201ENST00000327726 CATSPERGQ6ZRH7 1159 aa25.08■■□□□ 1.61
CFD-201ENST00000327726 ACER1Q8TDN7 264 aa25.08■■□□□ 1.61
CFD-201ENST00000327726 DEFB118Q96PH6 123 aa25.08■■□□□ 1.61
CFD-201ENST00000327726 PAK6Q9NQU5 681 aaPredicted RBP25.08■■□□□ 1.61
CFD-201ENST00000327726 RABGAP1Q9Y3P9 1069 aa25.08■■□□□ 1.61
CFD-201ENST00000327726 PRKAB2O43741 272 aa25.07■■□□□ 1.6
CFD-201ENST00000327726 GUCY1A2P33402 732 aa25.07■■□□□ 1.6
CFD-201ENST00000327726 CCNA1P78396 465 aa25.07■■□□□ 1.6
CFD-201ENST00000327726 TSHZ3Q63HK5 1081 aa25.07■■□□□ 1.6
CFD-201ENST00000327726 TMEM179Q6ZVK1 233 aa25.07■■□□□ 1.6
CFD-201ENST00000327726 UBE2Q1Q7Z7E8 422 aa25.07■■□□□ 1.6
CFD-201ENST00000327726 OTUD7AQ8TE49 926 aaPredicted RBP25.07■■□□□ 1.6
CFD-201ENST00000327726 CWC22Q9HCG8 908 aaKnown RBP25.07■■□□□ 1.6
CFD-201ENST00000327726 FARP2O94887 1054 aaPredicted RBP25.06■■□□□ 1.6
CFD-201ENST00000327726 IGHDP01880 384 aa25.06■■□□□ 1.6
CFD-201ENST00000327726 CYP2D6P10635 497 aa25.06■■□□□ 1.6
CFD-201ENST00000327726 XRCC5P13010 732 aaKnown RBP25.06■■□□□ 1.6
CFD-201ENST00000327726 SLFNL1Q499Z3 407 aa25.06■■□□□ 1.6
CFD-201ENST00000327726 TRMT44Q8IYL2 757 aaKnown RBP25.06■■□□□ 1.6
CFD-201ENST00000327726 DPF3Q92784 378 aa25.06■■□□□ 1.6
CFD-201ENST00000327726 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.06■■□□□ 1.65e-6■■■■□ 22.3
CFD-201ENST00000327726 PEX10O60683 326 aa25.05■■□□□ 1.6
CFD-201ENST00000327726 EVX2Q03828 476 aa25.05■■□□□ 1.6
CFD-201ENST00000327726 Q3C1V9 767 aa25.05■■□□□ 1.6
CFD-201ENST00000327726 LBX2Q6XYB7 198 aa25.05■■□□□ 1.6
CFD-201ENST00000327726 RPAP3Q9H6T3 665 aaPredicted RBP25.05■■□□□ 1.6
CFD-201ENST00000327726 HMX1Q9NP08 348 aaPredicted RBP25.05■■□□□ 1.6
CFD-201ENST00000327726 SLC4A4Q9Y6R1 1079 aa25.05■■□□□ 1.6
CFD-201ENST00000327726 RPTORQ8N122 1335 aa25.05■■□□□ 1.6
CFD-201ENST00000327726 MYH7P12883 1935 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 GLRX3O76003 335 aaKnown RBP25.04■■□□□ 1.6
CFD-201ENST00000327726 CYP2B6P20813 491 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 ANKRD45Q5TZF3 282 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 C12orf60Q5U649 245 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 GPR142Q7Z601 462 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 PLEKHH3Q7Z736 793 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 SLC44A5Q8NCS7 719 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 CCDC17Q96LX7 622 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 PORCNQ9H237 461 aa25.04■■□□□ 1.6
CFD-201ENST00000327726 USP17L12C9JPN9 530 aa25.03■■□□□ 1.6
CFD-201ENST00000327726 USP17L21D6R901 530 aa25.03■■□□□ 1.6
CFD-201ENST00000327726 HABP4Q5JVS0 413 aaKnown RBP25.03■■□□□ 1.6
CFD-201ENST00000327726 DYNLL2Q96FJ2 89 aa25.03■■□□□ 1.6
CFD-201ENST00000327726 CRISPLD2Q9H0B8 497 aa25.03■■□□□ 1.6
CFD-201ENST00000327726 PUS7LQ9H0K6 701 aaKnown RBP25.03■■□□□ 1.6
CFD-201ENST00000327726 SH2D4AQ9H788 454 aa25.03■■□□□ 1.6
CFD-201ENST00000327726 ARHGEF10LQ9HCE6 1279 aa25.03■■□□□ 1.6
CFD-201ENST00000327726 RGS2P41220 211 aa25.02■■□□□ 1.6
CFD-201ENST00000327726 KBTBD3Q8NAB2 608 aa25.02■■□□□ 1.6
CFD-201ENST00000327726 TRIB2Q92519 343 aa25.02■■□□□ 1.6
CFD-201ENST00000327726 RWDD1Q9H446 243 aaPredicted RBP25.02■■□□□ 1.6
CFD-201ENST00000327726 PLXNB2O15031 1838 aa25.02■■□□□ 1.6
CFD-201ENST00000327726 H0YGN5 161 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 CNMDO75829 334 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 CDK8P49336 464 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 POTEEQ6S8J3 1075 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 C16orf86Q6ZW13 317 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 SMC5Q8IY18 1101 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 HOXC10Q9NYD6 342 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 SALL3Q9BXA9 1300 aa25.01■■□□□ 1.59
CFD-201ENST00000327726 A0A1W2PRG0 241 aa25■■□□□ 1.59
CFD-201ENST00000327726 CHGBP05060 677 aa25■■□□□ 1.59
CFD-201ENST00000327726 ZFYP08048 801 aaPredicted RBP25■■□□□ 1.59
CFD-201ENST00000327726 ZKSCAN1P17029 563 aaPredicted RBP25■■□□□ 1.59
CFD-201ENST00000327726 COG2Q14746 738 aa25■■□□□ 1.59
CFD-201ENST00000327726 LRRFIP1Q32MZ4 808 aaKnown RBP25■■□□□ 1.59
CFD-201ENST00000327726 MORN1Q5T089 497 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms